>PF11262 (334 residues) WQKITPELYANFWALQLGDLYCPDKIYRQEKDRLRAEEVAISRDRSDMSRRGQERKVEKR KELMQLQIGLSEENSEHLLRQAKWKIYLNKQFQTSFPEPRAKPDTISDILLEQCFIPRML LSKADAEYTYKFIKALHEGNAPGFQLMSLYDRLFNANRLRALIFTSTVMEAEYLGRFLKL ILEDLSRWHKNATVPNEKDKSRDQPRLGVYEKEAKGPPDQPRLGFALTFDDNDKPLTFVE HEQFRDLLFRWHKNLNSALRSCLEGTEWMHIRNAITVLKAVLDFFPAIDFMATKFSSLLQ TITKQESAAKPSPDSEVGGRVDLSVAAQGAMSEL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | WQKITPELYANFWALQLGDLYCPDKIYRQEKDRLRAEEVAISRDRSDMSRRGQERKVEKRKELMQLQIGLSEENSEHLLRQAKWKIYLNKQFQTSFPEPRAKPDTISDILLEQCFIPRMLLSKADAEYTYKFIKALHEGNAPGFQLMSLYDRLFNANRLRALIFTSTVMEAEYLGRFLKLILEDLSRWHKNATVPNEKDKSRDQPRLGVYEKEAKGPPDQPRLGFALTFDDNDKPLTFVEHEQFRDLLFRWHKNLNSALRSCLEGTEWMHIRNAITVLKAVLDFFPAIDFMATKFSSLLQTITKQESAAKPSPDSEVGGRVDLSVAAQGAMSEL | |||||||||||||||||||
1 | 7apxA | 0.23 | 0.16 | 0.72 | 1.89 | FFAS-3D | LTKISKDLFTTFWRLSLYDIHFDKSLYDERKNAL------------------------SKHLIQNQIKDILVTGISHQRAFKKTSEFISEKSNVWE--------DQIKIFLQNCVVPRVLFSPSDALFSSFFI--FMAFRTENLMSILNTCIT--SNILKTLLFCCTSSEAGNLGLFFTDVLKKLEKMRLNGDFNDQ----------------------------------------------ASRKLYEWHSVITEQVIDLLSEKNYMSIRNGIEFMKHVTSVFPVVKAHIQLVYTTLEENLINEE------------REDIKLPSSALIGHL | |||||||||||||
2 | 7apxA | 0.24 | 0.17 | 0.72 | 1.74 | SPARKS-K | LTKISKDLFTTFWRLSLYDIHFDKSLYDERKNALS------------------------KHLIQNQIKDILVTGISHQRAFKKTSEFISEKSNVWE--------DQIKIFLQNCVVPRVLFSPSDALFSSFFIFMAFRT----ENLMSILNTCITSNILKTLLFCCTSSEAGNLGLFFTDVLKKLEKMRLNGDFNDQ----------------------------------------------ASRKLYEWHSVITEQVIDLLSEKNYMSIRNGIEFMKHVTSVFPVVKAHIQLVYTTLEE------------NLINEEREDIKLPSSALIGHL | |||||||||||||
3 | 1qgkA3 | 0.07 | 0.04 | 0.57 | 0.67 | DisCoVER | LGLKNYAEYQVCLAAVGLVGD-----------------------------------------------------------------LCRALQSNIIPFCDEVMQLLLENL--VHRSVKPQILSVFGDIAL--------A-IGGEF-KK--VLNTLQQASQAQLNELRESCLEAYTGIVQG---------------------------------------------LK-GDQENVHPDVM------LVQ---VEFILSFIDHIAGDHTDGVVACAAGLIGDLCTAFGKVLKLVEAR--MIHELLTEGR---RSKTNKAKTL--ARWATKELRKL- | |||||||||||||
4 | 6reyc | 0.06 | 0.04 | 0.72 | 0.83 | DEthreader | ------------------------------EIVYNKLDSDQLAQIKCNRAGFWTRKLSTILINLLKKKEL-DSVRRLHRAQNLALMRPELVIPPVLE-R---TYPALET--PHQLTATLS----CVIGVARSLVSGGRWFPEGTHMLPLLMRAL--PGVDPNDFSKCMITF-QFIATFSTLVP-LV-DCS-SVLQ------E-RN--DL-TEVER----------------------EL-C-SATAEFEDFVLQFMDRCFGLIESSTLELVEGLSSTFSTILTQCKIFMVALQKVFNFSTSH-IFET--------R--VAGRMVADMCRAAVKS | |||||||||||||
5 | 1w63C1 | 0.12 | 0.09 | 0.76 | 0.56 | CEthreader | ----MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMG-----------SSEMCRDLA--GEVEKLLKTSNSYLRKKAALCAVHVIRKV---------------------------------------------------------------PELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVISDPFLQVRILRLLRIL | |||||||||||||
6 | 7bzbA | 0.04 | 0.04 | 0.88 | 0.83 | EigenThreader | SVSLDRGEFDELEREIETMKPLVKDMLMSDVRGMLQLFEVAH--LGTPSE---DIMDEASSFAQNHLDSWIGILLKFAKLNFNFCQFHYIQELKTLTKWWKDLDLASKL------------PYIVESHLGGLGYSLGRIIVAKIIMTMVVVDDTYDAHAT-----------------VPEVAVLTECLQRLNIGADDKLPDYLRTVLESVFEVMGEIEQ-------EMRPKGRSYGVKQVLERFKNVAKADKQLYMKVGLVTAGIIQALNVMFRLANDVGTKQYGVTKEEASQELRKIYSNNKKVVMEEFMNSHDHVPCLNFARLFDVMYTEGD | |||||||||||||
7 | 3gniA | 0.10 | 0.07 | 0.71 | 0.41 | HHpred | ------------------------KSPADIVKNLKESMAVLEKQD---I-----------------------SDKKAEKATEEVSKNLVAMKEILYGTNEKAVAQLAQELYNSGLLSTLVADLQGKKDVAQIFNNILRRQIGTTPTVEYICT--QQNILFMLLKGYESPIALNCGIMLRECIRHLAKIILWSEQ-----------FYDFFR-YV------EMSTFDIASDA---------FATFKDLLTRHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIKPENLKLMMNLLRDK--------------SRNIQFEAFHV---- | |||||||||||||
8 | 6ek4A | 0.12 | 0.10 | 0.84 | 0.30 | MRFsearch | -----EIIQEKTLRISLYSRD-LDEAARASVPQLQTVLTEIDTELED-PELDDETRNTLLEARSEHIRNLKKDVKGVIRSLRKEANLMASRIADVS---NVVILERLESSLKEEQERKAEIQADIAQQEKNKAKLVVDRNKIIENLADMFKDYINISDLDKLDL--ANPKKELIKQAIKQGVEIAKKILGNI-------------------------------------------SKGLKYIELADARAKLDERINQINKDCDDLKGVEQRIAGIEDVHQIDKERTTLLLQAAKLEQAWNIFAKQLQNTIDGKIDQQDLTDFLDDLALQYHSML | |||||||||||||
9 | 7apkB | 0.30 | 0.19 | 0.64 | 1.66 | FFAS-3D | -SLVWDDISPQFYATFMYDLAVHTS-YEREVNKLK----------------------VEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLENETI------------TKFLQLCIFPRCIFSAIDAVYCARFVELVHQLL--------CYDRVF-------IIYTVASNEASRYGRFLCCMLETVTRWHQ------------------------------------------------LDYENFRHVVHKWHYKLTKASVHCL---EYTHIRNILIVLTKILPVLN----LGQALERRVHKICQ---------------EPDLYALAMGYSGQL | |||||||||||||
10 | 7apkB | 0.32 | 0.20 | 0.63 | 1.09 | SPARKS-K | WDDISPQFYATF----MYDLAV-HTSYEREVNKLKV----------------------EKERCTALQDKLLEEEKKQMEHVQRVLQRLKLE------------NETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQLL--------CYDRVFI-------IYTVASNEASRYGRFLCCMLETVTRWHQL------------------------------------------------DYENFRHVVHKWHYKLTKASVHCLE---YTHIRNILIVLTKILPVL----NLGQALERRVHKICQE---------------PDLYALAMGYSGQL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |