Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MAMTKKFKVSFDVTAKMSSDVQAILEKDMLHLCKQVGSGAIVPNGKQKEMIVQFLTHGMEGLMTFVVRTSFREAIKDMHEEYADKDSFKQSPATVREVF |
1 | 5k3jA2 | 0.07 | 0.06 | 0.90 | 1.00 | DEthreader | | ---------FPSRVVHCNMVMLLQLARYLVKSVELIKAGKAKLASYLANARRQAWKAELTRASRLHTRLFIIEAFMRRVSR-IEDIPKETDLHVELLDV |
2 | 1t11A1 | 0.07 | 0.06 | 0.88 | 0.84 | DisCoVER | | HMQVEGLQRRLN---ITVP--AANIEDAVAAELRNIAKNRRKGKVPMKMVAKMYGKAVRQDVLIN-PAGAPTFAPV--E---IGEGKDLVFTATFEVY- |
3 | 4rqoA2 | 0.04 | 0.03 | 0.82 | 1.00 | DEthreader | | --------ATLLCLLLVTAEIHKGILDIAKV-DDCINNGVNGI--IPAVLKYCQQDRSNEDIYTYFLTAAAIGILYKKGAS-G------GGVSAATAGG |
4 | 3jacA | 0.05 | 0.05 | 0.94 | 0.56 | CEthreader | | GGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 5e55A | 0.02 | 0.02 | 0.92 | 0.63 | EigenThreader | | IQIFTIQTRTYEFRVVAGNNIGTKAS-VPNVAPINGG---GGSRSELVITWEAI--PEELQNGGEDEPQLAP--RGTSVQSFSASEMEVSWNAIRAYNT |
6 | 1t11A | 0.14 | 0.13 | 0.95 | 0.32 | HHpred | | MQVTVETGLQRRLNITVPAANIEAVAAELRNIAKNRRKGK-VP----MKMVAKMYGKARQDVLGEVMQRHFIEAIVKEINPAGAFAPVEIKDLVFTATF |
7 | 1t11A1 | 0.11 | 0.10 | 0.91 | 0.68 | MRFsearch | | --MQVTVETLRRLNITVPAANEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGKARQDVLGEVMQRHFIEAIVKEK-------INPAGAPTFAPVE |
8 | 1t11A1 | 0.14 | 0.13 | 0.97 | 0.56 | FFAS-3D | | MQVTVETGLQRRLNITVPAANIEAVAAELRNIAKNRFDGFRKGKVPMKMVAKMYGKAVRQDVLGEVMQRHFIEAIVKEKVEIGEGKDLVFT-ATFEV-- |
9 | 6w2wA2 | 0.10 | 0.09 | 0.93 | 0.60 | SPARKS-K | | EAALLALLLLAKHPGSQAAQDAVQLATAALRAVEAACQKQYPNSDIAKKCIKAASEAEASKAAEEAQRQKARDEIKEASQKAEEVKERCERA------- |
10 | 4fvfA | 0.08 | 0.07 | 0.84 | 0.49 | CNFpred | | ---SVTISVDGVVYYRVQNTLAVANITNADSATRLL---------AQTTLRNALGTKNLSQILREEIAHHMQSTLDDATDDW----GIKVERVEIKDVK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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