Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | TGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMEDDILMDLI |
1 | 4nl6A | 0.28 | 0.23 | 0.84 | 1.88 | MRFsearch | | ---SAPWNSFLPPPPPMPGPRLGPGKPGLKGPPPPPPPPPPHLLSCWLPPFPSGPPI-----------IPPPPPICPDSLDDADALGSML |
2 | 3boiA | 0.15 | 0.13 | 0.90 | 1.26 | SPARKS-K | | -CKGADGAHGVNGCPGTAGAAGSVGGPG-CDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPGAP------- |
3 | 5nenA2 | 0.08 | 0.06 | 0.70 | 0.67 | DisCoVER | | TVQAPASGIIKNIA------VRDGDKVKAGEVLVQLSTAIT-----SPVDGTVVGLNTQGGVVGAGDHLM---------------DVVP- |
4 | 2ichB2 | 0.08 | 0.08 | 1.00 | 0.74 | CEthreader | | NLDDGSALAFQIRGKDDSKIWAYAALSGHTRLFTPDQVSFHPIRTWRSARTQAVYPVATRVLTGETEWQITPLDDGAVTFTRDGQPAGRG |
5 | 4jr4A | 0.03 | 0.03 | 0.98 | 0.52 | EigenThreader | | QPGTSNPKAYEDFLCPACGAILDSASNQHYSSRAAAAAYCVADESLAREAGVVGKVGKYSTPAALVAKIKEIVGDVPGIDSAAATATS-- |
6 | 5k0yM | 0.27 | 0.08 | 0.29 | 0.19 | HHpred | | --------------------------------------------------------------KFGNSEFDP--PGVATTTVSDDVSMTFI |
7 | 2pffB | 0.16 | 0.14 | 0.92 | 1.40 | MRFsearch | | -------DDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGMGMDLY |
8 | 3j2k73 | 0.11 | 0.10 | 0.89 | 0.40 | FFAS-3D | | SIICPGYNAVLHIHTCIEEVEITALISLVDKEKSKTRPRFVKQDQVCIARLRTAGTICGRFTLR--DEGKTIAIGKVLKLVQ-------- |
9 | 3bogA | 0.19 | 0.16 | 0.81 | 1.19 | SPARKS-K | | HGVGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGG----SGTPKGADGAPGAP------------- |
10 | 6n7pX | 0.22 | 0.06 | 0.26 | 0.31 | CNFpred | | -------------------------------------------------------------------FETVVPISTYAGQLFNDIIIDLV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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