>PF11229 (537 residues) DTLRSLTEESQQTPGFSLALGLLVHGLAVSGHGKAEDIHPRLLAAWIKILLAEGCPTMQR LAAANGLVALVGSESCLIQLQTEMELSSQQQSRLNEVIRAITQIITFSGAIGLQSNSACL IGHLHLAHMSTSHTHTAVPQDFSYLPEKSVIRSIMDFISEAGKKGPEFSHPALVSTALSP LASVGASFQYPPVNWSAVLSPLMRLSFGEDIQHQCVVLAATQAQSSQSASLFLGSWLSPP LVHSLSHRTRAHLYETLGVWMKHMAEDKLQVYVQSLGLQQFQEDVRAQRVSLCQSLLQGL AQAMALPNPPNHCWTILCSSAEKIFGLLPNQIQDAEVDLYVGVAKCLSEMSDSEIDRIVQ VSQAQMEKTCFVLAYLTSQGRVPLLSLNDVIAGVLRGWPSCRVGWILLQAFYQCRLAASA NTGVSKRLEWLLELMGHIRNIGYGATPVSCGDARLATDFLFRLFAAAVISWGDHYMPLLF GIRPQWFPWQPASKPATLTHGLYGAVSLSELALSQCLLGVSHSLPLLLDKEPWSSQT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DTLRSLTEESQQTPGFSLALGLLVHGLAVSGHGKAEDIHPRLLAAWIKILLAEGCPTMQRLAAANGLVALVGSESCLIQLQTEMELSSQQQSRLNEVIRAITQIITFSGAIGLQSNSACLIGHLHLAHMSTSHTHTAVPQDFSYLPEKSVIRSIMDFISEAGKKGPEFSHPALVSTALSPLASVGASFQYPPVNWSAVLSPLMRLSFGEDIQHQCVVLAATQAQSSQSASLFLGSWLSPPLVHSLSHRTRAHLYETLGVWMKHMAEDKLQVYVQSLGLQQFQEDVRAQRVSLCQSLLQGLAQAMALPNPPNHCWTILCSSAEKIFGLLPNQIQDAEVDLYVGVAKCLSEMSDSEIDRIVQVSQAQMEKTCFVLAYLTSQGRVPLLSLNDVIAGVLRGWPSCRVGWILLQAFYQCRLAASANTGVSKRLEWLLELMGHIRNIGYGATPVSCGDARLATDFLFRLFAAAVISWGDHYMPLLFGIRPQWFPWQPASKPATLTHGLYGAVSLSELALSQCLLGVSHSLPLLLDKEPWSSQT | |||||||||||||||||||
1 | 3w3tA | 0.10 | 0.09 | 0.87 | 1.17 | EigenThreader | IEYLLTFLAEQAAFSAALSAVLFRKLALKAPITHIRKEVLAQIRSSLLKGFLSERADSIRHKLSDAIAE-----CVQDDLPAW------------PELLQALIESLKSGNPNFRESSFRILTTV--------------------PYLITAVNSILPIFQSGFTDASDNVKIAAVTAFVGYFKQLPKSEWSKLGILLPSLLNSFLDDGKDDALASVFESLIELVELAPKLFKIIQFTDMVIKNKDLEPPARTTALELLTVFSENAPQMCKSNYGQTLVMVTLIMMTEVSIDDHARQALDRVALKLG--------GEYLAAPLFQYLQQMITSTEWRERFAAMMALSSAAEGCADVLILINDPHPRVQYGCCNVLGQISTDFSPAHDRILPALISKLTSECTSRVQTHAAAALVNFSE----FASKDILEPYLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAAKNKFIKYYDTLMPLLLNVLKV--------------------NSVLKGKCMECATLIGFAVGKEKFHEHSQELI | |||||||||||||
2 | 2x1gF | 0.12 | 0.11 | 0.93 | 1.39 | FFAS-3D | --LSGITSADPELSILVHRVQEILHCTDKPGYPVEESCSTMALAFWYMLQDEVFAHKCWEYIKTRILVRKSEQPDEKSLAKWSSDDLECFRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHPTHWTKLEACIFQSVAEHRQIPRLMRVLAEI---PYEKLNVKLLGTALETMGSYNWLMYIPPA-INLLVRGLN--SSMSAQATLGLKELCRDCQLQPYADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSLLRPEEIPKYLDIIVSPCFEEQATPAARIRTIFRLNMISRIAEMWVEEIDVLEAACSAMKHAITNLRSQPFQCCAPTLEISKTAIVMFFKPLMQQLLREISDTMETFFGCLTQIIKKIPQVLEDYDRLVFYAQRTLPESGAIRNSIQFLTHFVMQSRNHAHVTEVVATGEQTLYTAMMCVGYLTP------RSQVDKFADILLAMNRKYAAEMAVWM---------------KSLMSTPNFPTQLITDADKTRYTALIKRLLQQHLSE------- | |||||||||||||
3 | 6tc0C | 0.10 | 0.09 | 0.91 | 1.09 | SPARKS-K | DFLPSLWASIRREAEGLAALHSLTACLSCSVEDLLGSFLSNILQDCRHHLCEPD--MKLVWPSAKLLQAAAGASA------------RACEHLTSNVLPLLLEQFHKHSQSNQRRTILEMILGFLKLQQKWSYEDR------DERPLSSFKDQLCSLVFMALTDPST-QLQLVGIRTLTVLGAQPGL-----LSVGHLYRLTFLEEDSQSCRVAALEASGTLATLYFRCLQALSAVST-------HPSIVKETLPLLLQHLCQAESSEVVAVCQSLQQVAEKCQDPESYWYFHKTAVPCLFALAVQPLLEDEVLAALASVIGTATTHLSP---ELAAQSVTCIVPLFLDGNTSFLPQPFQDGSSGQRRLVALLTAFVVEIPQLNRLMRELLKQSCGHSCP-FSSTAATKCFAGLLNKQPPG---QQLEEFLQLAVGTVEAGLASE-----SSRDQAFTLLLWVTKALVLRYHPLSTTRLMGLLSDFSLLMSDCTDVLTRAGHADV---RIMFRQRFFTDNVPALVQGFHAAPQDVKP | |||||||||||||
4 | 5vchA | 0.10 | 0.09 | 0.91 | 1.58 | CNFpred | QVLDATIRE--GDTTNTKLIFNCLNDFLLLDSQLTGNTIADLVKLALQIAVNSDVDEDIRVFAVQFVTSALVYRKSKINQ-----------KLGPEITLAALKVASEE--NTPALTALRLISNASGEL-----------------SPSQVGVPIIEHLPTMLSS-SNPFERRSILLAISVLVTGS--PDYTLSQFDKIIPATVTGL-EAVVQLAALKCIVQLSTNQDEVARYHEQYLPLVIDIAKHVVIYKYATLALDGLLEFIAHNDIIKYLDPLMNKLFQMLETQQSPKLRAAIVSAIGSCAFAA--GSGFVPYFKTSVQYLQQFIQN-LSEDDIELKALTFENISTMGRAVKSAAFAEYAEPLVNAAYEAIKTDSARESGYAFIANMAKVYGKD---APFLQTIIPEIFKTLEQEEYNTGIAYEKEVAAAALSELAIASKEHF----EYVEPSLKVLAEQVNESLKETALHSMWAIVKAVLLTANLKEGEYPKGVPSGSY----VDASALAVIQTVREVSLNNVIEEVETSMVI | |||||||||||||
5 | 1vsy5 | 0.09 | 0.08 | 0.83 | 1.00 | DEthreader | KPDKRAVFSISQVVKSLLSTCNKIISLDYANPSFKLNLELEVLKTAGHLLTREFLRDVTMLGNVSFFSLVIL-----------------LISS-GFCELNMSDLFELCSYSIMSVEIVAGLVCGS-KF---------MSVSDLDKRDTF-IENFLAKCL---------D-YELNHDAFEIWSTLAWWLPVLFFCHFINADGMFDREDAATHQTSKIYMLRSILMSMFRAPDV-GKLFDELVFDHPYDQVRQAVAKLLTTLVQNQSVPKVDAYIKKQFEIIKLEVNPFIYFYRTSTIFYWIKEMARGPNKVL-LVPYLVDYVLPFLIGLVKHKDCASLDPVRLYAGLGYMIRVAAIVDYVCSNVALSSQTKLQLAFIQHFSAELKNKILEFVVSNLYNEQFVEVRVRAASILS-DI--V----HNWKEEQPLLSLIERFAKGLD--------KTDIKIHGNVLGLGAIISAFPYV-------------------------------A-RTSGMTGNAAKNTISEFKRWFDRASF---- | |||||||||||||
6 | 5ifeC | 0.07 | 0.07 | 0.94 | 1.15 | EigenThreader | LGIPSLLPFLKAVCQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVD--EQQKVRTISALAIAALAEAAT----PYGI--------ESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMYYTREVMLILIREFQSPDEEMKKIVLKVVKQCC----GTDGVEANYIKTEIFFKHFWQHRMALDAAEIISRIVDDLKDEARKMVMETIEKIMGNLGAADILEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLN--NKSAKVRQQAADLISRTAVVMKTCQE----EKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSICFELLELLKAHKKAIRRATVNTFGYIAKAIGLATLQNRVCTTVAIAIVAETCPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR---------DLVHRQTASAVVQHMSLGVYHLLNYVWPNVFETSPHVIQ | |||||||||||||
7 | 6wg3E | 0.11 | 0.11 | 0.95 | 1.38 | FFAS-3D | -KVLNILEKNIQDERVTKSADACLTTINIMTSPNMEDVIERVIQYTKFHLQNRQRVIVMLYNKVCDIVSSLSELLEIQLLT---------DTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRSLARLPTSKRSLRNFRLQMVTALVLQLIQFLKKCGSKQGEEDYRPLFENFVQDLLST---VNKP--EWELLLSLLGRLSTEMALRVASLDYLTSKMDEIQQLQKALLDYLDENTETDPSLVFSRKFYRDTTLETEKKEIETTGQIMHRAENRKKFLRSDTVDYDSFDIYLTQILRVLGENAIATKAMKCLSEVVAVMQRGVHGRLMDNSTSVREAAVELLGRFVDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWTPHNDKEAMTRKILNITDVVALLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKYEENSLFLFSKIRPQLMVKHAMTMQPYLTTKC--STQNDFMVICNVAKILELVVPLM---------- | |||||||||||||
8 | 4fgvA | 0.08 | 0.07 | 0.90 | 1.09 | SPARKS-K | EKLARQVDGSEWSWHNCNVLCWAIGSISMAMNETEKRFLVTVIKDLLGLTEMKR-GKDNKAVVASNIMYIVGQYPRFLKA---------HWKFLKTVVNKLFEFM-HESHEGVQDMACDTFIKIAKQHFVALQPSENEP----------FIEEIIRNIGKITCDLTPQQVHTFYEACGYMVSAQGNR-----NQQERLLAELM-----AIPNAAWDEIIKAATMNPGILHKIIGNIMKTNVCSSIGPYFFPQIGRLYNDMLQMYASQLISEAVARDGEIATKMPKVRGLRTIKKEILKLVETFVEKAEDLQAVRSQIPGLLDSVLVDYNRNVPGADAEVLKAMTVIITRLQGLMVPAIMENYPEHRVEFFNLLRAINLYC---FPALLFVIDSCMWAHDNRDVETAGLNMCLELINNIAEKTDNAFFNQFFIRILQDVFFVLTD------TDHKAGFKTQSMLLMRLFYFVHP---------------ADGSAPKIQGPIYQPDQAQPGTGNREFLANFVGTLLQNAFANLTPLQIT | |||||||||||||
9 | 3w3zA | 0.12 | 0.10 | 0.83 | 1.55 | CNFpred | DDAAEWIES-DEEEVTYDHARQALDRVALKL------GGEYLAAPLFQYLQQMSTEWRERFAAMMALSSAAEGCADVLI-------------EIPKILDMVIPLIND-PHPRVQYGCCNVLGQISTDFSPFIQR-----------AHDRILPALISKLTSE-------CTSRVQTHAAAALVNFSSKDILE-PYLDSLLTNLLVLL-KLYVQEQALTTIAFIAEAANKFIKYYDTLMPLLL----NSVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNS-ALRSYLEQSWSRICRILGD-----DFVPLLPIVIPPLLITAKATQHTSVLDDKVSAMELLQSYFAVYVKEVM-LHDGVRAAGATLIPILLSCLL-LVLLWHKASSKLIGGEPMPEITQVYHNSLVNGIKVMGDNCLSEDQLAAFTKGVSANLTDTYERM----FTDEDLLDEINKSIAAVLKTTNGHYLKNLENIW---------------------------PMINTFLLLVIFALVVIGD-------- | |||||||||||||
10 | 6reyc | 0.06 | 0.04 | 0.81 | 1.00 | DEthreader | -RVLPLRAIRFFVLAAVAGILKQLKRTHKKLYAEQPKLGRMTEQIIFDHFSDPKFVEQLILRRFCLFKGIFR---------------------N-FDDAFLPVLKPHLHLTRCVAEIIAGLIRGS-KH---------WTFEKVEKLWEL-LCPLLRTA------------LSNITVETYNDWGACIATSCLHWLFELLLESPLSGEGGSFVDACRLYVLQGGLAQQERVPELLHRLLKEPKLTQVYKNVRERIGSVLTYIFMIDTISPHVEFTARILEKLKPLTQGIKLLKTILKWLMASAGR--S-FS---TA--VTEQLQLLPLFFKIAPVENKRDAKLCLSLMSGLLYPHQVPLVLQVKQTARRTVLTYLQTMVFYNLFLVKDIRWLVISLL-EDEQLEVREMAATTLSGLL--------QCNF-LTMDSPMQIHFEQLCKTK-----AELVKRHAGVLGLGACVLSSPYDV-----------------------------NDPQPIEMTVKKTLSNFRTHWEHKQQF------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |