>PF11228 (191 residues) GEHLGMQAEGDRVLTHYFACLDPAYKGWRWAVTVVRAARAKVVTVNECVLVPGEGALMPP PWVPWIERLRPGDLGPGDLLPTPADDPRLAPGYTETSDEAERQVQWELGLGRVRVLSAEG RAQAAARWYEGTAGPRTPIAASAPAQCSTCGFYVPLSGELRQMFGVCANEYAPDDGRVVS ADHGCGAHSEA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GEHLGMQAEGDRVLTHYFACLDPAYKGWRWAVTVVRAARAKVVTVNECVLVPGEGALMPPPWVPWIERLRPGDLGPGDLLPTPADDPRLAPGYTETSDEAERQVQWELGLGRVRVLSAEGRAQAAARWYEGTAGPRTPIAASAPAQCSTCGFYVPLSGELRQMFGVCANEYAPDDGRVVSADHGCGAHSEA | |||||||||||||||||||
1 | 4m8rA | 0.02 | 0.02 | 0.77 | 0.55 | DisCoVER | DFRSVVNLQKTYGLCGLAEE--NVQ----QPFFLDFCT-----GEWKALS------FYDY-NTLAL-------VIGSGNIAAIQQRGYSLYNVSAGLEQSNYATKT---RSNFPEPQ--F--EL--PEGFPEQFGDY-PG-VFQG-N--EIILLSARKGNGKWVPLYNYRNG---FYVLDAIIPFYLYQK- | |||||||||||||
2 | 2q5tA | 0.04 | 0.03 | 0.74 | 0.83 | DEthreader | GVLYYSMTINDEFAINWLVPIGDSPA-SIKISVDE-LDQQRNIIEPKLYSIDLDN----RHKWAHLACPMDAIYQKPVEQRI----GVPLAQAIVFTILFSHLDMVTQVLVA--------------------CPDADKSCV-ASNNANINIES--HVAATI-RIAP------PAS----IGWDMI------ | |||||||||||||
3 | 3bykA | 0.07 | 0.07 | 1.00 | 0.69 | CEthreader | EWSGSATFTSDGKIRLFYTDFKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVL | |||||||||||||
4 | 4hizA | 0.06 | 0.05 | 0.81 | 0.62 | EigenThreader | TETHSFTVIDDNYAVGYHNGDISPRDNAAEPCIKYYD----GILYLTTRGTSTSAAGSDFKYGAT---PNRTLPAPVTFDNDVQMYSLTVTGLEHDGTQ----------QSAVRVKLD-----------GDYGVIAKN-----IPIKNPSEQILCGTDG---SLLQLYGSNHTYPNRLYAPGGAYTQNNFM | |||||||||||||
5 | 5u2gA2 | 0.14 | 0.04 | 0.30 | 0.32 | HHpred | ----------------GFLRKLPDSEPFIPAAVIGIVKGG--AD---ILLASGEK-TLSTN-ARWTNPVKVGE-----QIWIHQRA--------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1yfuA | 0.12 | 0.05 | 0.39 | 0.47 | MRFsearch | --RHSPQRPEAGSACLVIERQRGMLDGFEWYCDA------CGHLVHRVEVQLKS--------------------------------------------------------------IVTDLPPLFESFYASE----------DKRRCPHCGQVHP------------------------------------ | |||||||||||||
7 | 6w09A | 0.20 | 0.18 | 0.87 | 0.31 | FFAS-3D | -EFASAYRAHTASASAKLRVLYQGNN----VTVSAYANGDHAVTVKDAKFIVGP---MSSAWTPFDNKIRPGQFGDIQSRTPESEDVYANTQLVLQRP----------SAGTVHVPAPSGF----KYWLKERGAS---LQHTAPFGCQNCAVGMPISIDIPDAAFVPACTHSSDFGGVAIIKYACAVHSMT | |||||||||||||
8 | 6rj1A | 0.15 | 0.14 | 0.92 | 0.87 | SPARKS-K | PAYLGLDVVADHLVFAAFKA----------GAVGYDMTTDSSASTYNQALAWSTTAGLDSD-GGYKALVENTAGLNGPVTPVSQNNEEVQTTYPVKSDQDGVTVFDALGLNEERLPSESELKSARENAQST---SDDNSNTKVKWT-NTASHYLPVANFPEAGVKISTLESQATDGFANSLNFGTGLKAGV | |||||||||||||
9 | 4oicA | 0.15 | 0.06 | 0.43 | 0.59 | CNFpred | TERLEMLDDDRHIISFRVVGGQHRLRNYRSVTSVTEFQ-PPYCVVVESYVVDVP---------------------------------------DGNTAEDTRMFTDTV--------VKLNLQMLAAVAED------------------------------------------------------------- | |||||||||||||
10 | 1wpxA | 0.04 | 0.03 | 0.78 | 0.83 | DEthreader | --KIKDPKIDPVTQYTGYLDVEDE-DKHFFFWTFESRN-DPADVTVIFLDQVSYSGSSGVSVAGYPVFASLNLTSV-LIGNGLTDPTQYYYEACGE---PSECSAMPYTRNVFICNWLGNKATD-ASQKVRNWTAS----I----T----------------VAGEV----HFTY-LRVFNVENAMV---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |