>PF11172 (190 residues) YYGTMEKFGVHKRDIMVDRVEEARDSQQDAKEQFQSALEQFSQVLNYKGGKLEDKYKTLQ AEYDKSEAKADEVTKRIDAVEDVSEALFDEWEDELDQYTNKSLRRDSERKLAQTRKQYEQ LIKAMRRAETKIDPVLKAFRDQVLYLKHNLNAQAIASLQSELVAVESDIADLIKEMEKSI GEANSFIRTM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | YYGTMEKFGVHKRDIMVDRVEEARDSQQDAKEQFQSALEQFSQVLNYKGGKLEDKYKTLQAEYDKSEAKADEVTKRIDAVEDVSEALFDEWEDELDQYTNKSLRRDSERKLAQTRKQYEQLIKAMRRAETKIDPVLKAFRDQVLYLKHNLNAQAIASLQSELVAVESDIADLIKEMEKSIGEANSFIRTM | |||||||||||||||||||
1 | 4a01A | 0.05 | 0.05 | 0.98 | 1.17 | DEthreader | ----TELIYIWFEAITGYGLGGSSMALFGRVGGGIYTKAADVGDLVGRNIPEDDNAVIDNVGDNVGDIGMGSDLFGSYAESSCAAPILFLCVALAGLIGTSVIPIFAIAISIFFILALFSLAGSLVSGVQIAISASNTGGAWDNAKKYIEKGCHKAAVIGDTIGDPLKTSGPSLNILIKLMAVESLVFAP | |||||||||||||
2 | 6ewyA | 0.14 | 0.12 | 0.89 | 1.11 | FFAS-3D | ----------DTIAALIADVAKANQRLQDLSDEVQAEQESVNKA--------MVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAATYMNKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQD--AAVAALTETRRKFDEQREEVQRLAAERDAALQAARLVAWSS | |||||||||||||
3 | 4ui9I | 0.07 | 0.07 | 0.98 | 1.33 | DEthreader | DENLLLLGYMTHISALLQYINLSLTCMCEAWEEILMQMDSRLKFLLLMNQLTVKGLKKLGQSISSYSSIQKLVISHLQSGSESLLYHLSELKGMASWKQKYEPLGLDAAGIEEAITAVGSFILKANELLQVIDSSMKNFKAFFRWLYVAMLRM---IVAFLTEHFFNVER-VGQYLDSLHFVKRRMENID | |||||||||||||
4 | 4av3A | 0.04 | 0.04 | 0.97 | 1.00 | DEthreader | --VAA-FFYKVDLPFAMTVSGYALGCSIIAMFDRGGGVYTKAADMADVGKNPTIADNVGDNVGVAGLGADLLESFVGAIVSSILAPLSPWFSAIGIFGIIGPTTLVLGLFADYGLVLSFASYGLITVSGAMLAILTANSGGA-DNA-KYEKHKLVIGDTVGDPLKTVGPSLDILIKIMSVVSVIAVSIK- | |||||||||||||
5 | 1cunA | 0.11 | 0.10 | 0.91 | 1.10 | FFAS-3D | ----------TGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIK--KNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENSA----- | |||||||||||||
6 | 6ek7A | 0.09 | 0.08 | 0.92 | 1.17 | DEthreader | --G--PKDIKLLFDEIHNHALNWNDVEQAVLQQSLDLDIAAKNIISTIALILDDMKGDINRHQTTTENVRKKVSDYRITLTGLEPQVKTKYDLMESNQRAQTALEALSLSFSDIGIRMVDAESALNHLDFMWLSVLNQITESQIQFAMINFVNKFQQVITPWQSVGDSARQLVDI-FD-AI--------- | |||||||||||||
7 | 3i9yA | 0.05 | 0.04 | 0.70 | 0.64 | DisCoVER | ---------------AMIEARQVSELSTRIISSVQMLSNAQ-------------NEQERKEAGRVLFEQLESLLTHIKELGGES----------------------------FDSKLLDALESNVQNVINNLAELGVTVERKLWLAKEIVVFTILLQQYENNEQSQQLMQKTLELFSELNSTVNKLVDD- | |||||||||||||
8 | 6lodC | 0.07 | 0.06 | 0.85 | 1.00 | DEthreader | SLAVLFTVGVGVWINAWGDIINFVWWIGIGHAGTLISALLLRQD----------T-SINRAAEAMTIFAVACAGI---YPLVHT-GRPW-LD--Y---------LP-YPGTLGMWPQFRSALEWDVFAISTYATVSILFWYLGLIPLAWRGGADWNRYEVASLILAGLSTPLVLSVHSIISLDFISQL-L | |||||||||||||
9 | 2b0hA | 0.05 | 0.04 | 0.72 | 0.54 | CEthreader | --GIDPFTMGDPEGSFVDYQTTMVRTAKAIAVTVQEMVTKSNT-----------SPEELGPLANQLTSDYGRLASQAKPAAVAAEN----------------------------EEIGAHIKHRVQELGHGCSALVTKAGALQCSPSD----------VYTKKELIECARRVSEKVSHVLAALQAGNR-- | |||||||||||||
10 | 6gy6A | 0.08 | 0.08 | 0.99 | 0.87 | EigenThreader | LKPAKMATLFKEIHDHALSWSGVESKVQQQSIDLENAGKQITLTGNKLGDLLGNILESMKKDIKRQQENTQKVKTAVSDFKLKLIQFQKDYNKYVGLAFSGITGGIFGDKAEKARKSMVDAEEALNHLDFMWNTMLTQITTSRDKFDDILKLTSFVIAFKQVIEPWRDVQGSAAQLIQTFDEALAEYKK- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |