Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | YYGTMEKFGVHKRDIMVDRVEEARDSQQDAKEQFQSALEQFSQVLNYKGGKLEDKYKTLQAEYDKSEAKADEVTKRIDAVEDVSEALFDEWEDELDQYTNKSLRRDSERKLAQTRKQYEQLIKAMRRAETKIDPVLKAFRDQVLYLKHNLNAQAIASLQSELVAVESDIADLIKEMEKSIGEANSFIRTM |
1 | 4a01A | 0.05 | 0.05 | 0.98 | 1.17 | DEthreader | | ----TELIYIWFEAITGYGLGGSSMALFGRVGGGIYTKAADVGDLVGRNIPEDDNAVIDNVGDNVGDIGMGSDLFGSYAESSCAAPILFLCVALAGLIGTSVIPIFAIAISIFFILALFSLAGSLVSGVQIAISASNTGGAWDNAKKYIEKGCHKAAVIGDTIGDPLKTSGPSLNILIKLMAVESLVFAP |
2 | 6ewyA | 0.14 | 0.12 | 0.89 | 1.11 | FFAS-3D | | ----------DTIAALIADVAKANQRLQDLSDEVQAEQESVNKA--------MVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAATYMNKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQD--AAVAALTETRRKFDEQREEVQRLAAERDAALQAARLVAWSS |
3 | 4ui9I | 0.07 | 0.07 | 0.98 | 1.33 | DEthreader | | DENLLLLGYMTHISALLQYINLSLTCMCEAWEEILMQMDSRLKFLLLMNQLTVKGLKKLGQSISSYSSIQKLVISHLQSGSESLLYHLSELKGMASWKQKYEPLGLDAAGIEEAITAVGSFILKANELLQVIDSSMKNFKAFFRWLYVAMLRM---IVAFLTEHFFNVER-VGQYLDSLHFVKRRMENID |
4 | 4av3A | 0.04 | 0.04 | 0.97 | 1.00 | DEthreader | | --VAA-FFYKVDLPFAMTVSGYALGCSIIAMFDRGGGVYTKAADMADVGKNPTIADNVGDNVGVAGLGADLLESFVGAIVSSILAPLSPWFSAIGIFGIIGPTTLVLGLFADYGLVLSFASYGLITVSGAMLAILTANSGGA-DNA-KYEKHKLVIGDTVGDPLKTVGPSLDILIKIMSVVSVIAVSIK- |
5 | 1cunA | 0.11 | 0.10 | 0.91 | 1.10 | FFAS-3D | | ----------TGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIK--KNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENSA----- |
6 | 6ek7A | 0.09 | 0.08 | 0.92 | 1.17 | DEthreader | | --G--PKDIKLLFDEIHNHALNWNDVEQAVLQQSLDLDIAAKNIISTIALILDDMKGDINRHQTTTENVRKKVSDYRITLTGLEPQVKTKYDLMESNQRAQTALEALSLSFSDIGIRMVDAESALNHLDFMWLSVLNQITESQIQFAMINFVNKFQQVITPWQSVGDSARQLVDI-FD-AI--------- |
7 | 3i9yA | 0.05 | 0.04 | 0.70 | 0.64 | DisCoVER | | ---------------AMIEARQVSELSTRIISSVQMLSNAQ-------------NEQERKEAGRVLFEQLESLLTHIKELGGES----------------------------FDSKLLDALESNVQNVINNLAELGVTVERKLWLAKEIVVFTILLQQYENNEQSQQLMQKTLELFSELNSTVNKLVDD- |
8 | 6lodC | 0.07 | 0.06 | 0.85 | 1.00 | DEthreader | | SLAVLFTVGVGVWINAWGDIINFVWWIGIGHAGTLISALLLRQD----------T-SINRAAEAMTIFAVACAGI---YPLVHT-GRPW-LD--Y---------LP-YPGTLGMWPQFRSALEWDVFAISTYATVSILFWYLGLIPLAWRGGADWNRYEVASLILAGLSTPLVLSVHSIISLDFISQL-L |
9 | 2b0hA | 0.05 | 0.04 | 0.72 | 0.54 | CEthreader | | --GIDPFTMGDPEGSFVDYQTTMVRTAKAIAVTVQEMVTKSNT-----------SPEELGPLANQLTSDYGRLASQAKPAAVAAEN----------------------------EEIGAHIKHRVQELGHGCSALVTKAGALQCSPSD----------VYTKKELIECARRVSEKVSHVLAALQAGNR-- |
10 | 6gy6A | 0.08 | 0.08 | 0.99 | 0.87 | EigenThreader | | LKPAKMATLFKEIHDHALSWSGVESKVQQQSIDLENAGKQITLTGNKLGDLLGNILESMKKDIKRQQENTQKVKTAVSDFKLKLIQFQKDYNKYVGLAFSGITGGIFGDKAEKARKSMVDAEEALNHLDFMWNTMLTQITTSRDKFDDILKLTSFVIAFKQVIEPWRDVQGSAAQLIQTFDEALAEYKK- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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