Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | DDLVRNFERIAFFDEYSRGGRGGGTLSRWEVPVRVGIEFGPSVPPAQRNKDDADIRAYVARLARITGHPISVTDRRTNFHVFVAGEDDRDFVQNRMRQLVSGVSDSELSLFRDLPRSFYCFVVAVSDRRNPNAYVHAAALIRAEHPDLVHLSCIHEELAQGLGLPNDSPQVRPSIFNDDDEFALLTTHDEMLLRMLYDPRLSPGMTAEQARPVA |
1 | 1srpA | 0.10 | 0.07 | 0.75 | 1.00 | DEthreader | | GSNEQAGLFITR-E-----------NQTWNVKLTFSFPDYFGLSK-FSAEQQQQAKLSLQSWADVANITFTEVAQKANITFGNYSQD-RPG--------------------H-YDYGTQAYAFLPNTI-----DLGGQTWYNVNQSNEYGRQTFTHEIGHALGLSHPGVYDTFSLMSYWSHYAAPLLDDIAAIQHLYGA--------------G |
2 | 1srpA | 0.08 | 0.06 | 0.77 | 1.00 | DEthreader | | GSNEQAGLFIT-RENQ--------YKVFQPVKLTFSFPDYFGLSK-FSAEQQQQAKLSLQSWADVANITFTEVAQKANITFGNYS--QDRPG-------------------H--DYGTQAYAFLPNTIW-G-QDLGGQTWYNVNQSNEYGRQTFTHEIGHALGLSHPGVYDTRSLMSYSEYAAAPLLDDIAAIQHLYGA--------------G |
3 | 1srpA1 | 0.09 | 0.07 | 0.77 | 1.05 | MAPalign | | --NEQAGLFIT--RENQTWNGYKVFGQP--VKLTFSFPYDTGL---SKFSQQQQAKLSLQSWADVANITFTEVGQKANITFGNYSQDPGHYD-----------------------YGTQAYAFLPNTIWQGQD-LGGQTWYNVNQ--SNVRQTFTHEIGHALGLSHPYAEDQFSLMSGGHYAAAPLLDDIAAIQHL------YGAN-------- |
4 | 1su3B3 | 0.15 | 0.11 | 0.72 | 1.46 | HHsearch | | --------------------------PRWEQHLTYRIENYTP--DLPRADVDHAIEKAFQLWSNVTPLTFTKVSGQADIMISFVRGDHRDN--------SPFD------------GPGGNLAHAFQ--PG--PGIGGDAHFDEDEREYNLHRVAAHELGHSLGLSHSTD--IGALMYPSSGDVQLAQDDIDGIQAIYGRSQNPVQPIGP----- |
5 | 4l6tA | 0.13 | 0.10 | 0.73 | 1.00 | DEthreader | | -NE-KKV--IG--YAD----H-NGQLYNISGVINYTVPDENITI-LTIN-YSDYVREAFNEWA-PSGIRVQQVSSR-VVSFSTT-N--Y------------------------AD-NSLGSTIFDPS-------GNSRTRIDINVIKLKLRITIKHEIGHILGL-LHNNEGAPSIMLDYIDLDIGSRNDIEGVRVMR---RG--GSGN-SFTNS |
6 | 1go7P | 0.09 | 0.07 | 0.74 | 1.00 | DEthreader | | GSIDQAAAQITR-E-----------NVSWNANLTFKFLQSGFVK--FNAEQIEQAKLSLQSWSDVANLTFTEVTKSANITFGNY-TR-DA------------------S--GNLDYGTQAYAYYPGNY-----QGAGSSWYNYNQSNEYGRQTFTHKIGHALGLAHPGAYDSFSICSYWGYGGAPMIDDIAAIQRLYGA--------------G |
7 | 1srpA1 | 0.08 | 0.06 | 0.76 | 1.00 | DEthreader | | GSNEQAGLFIT-RENQ--------YKVFQPVKLTFSFPDYFGLSK-FSAEQQQQAKLSLQSWADVANITFTEVAQKANITFGNYS-Q-DRP--------------------H--DYGTQAYAFLPNTI--G-QDLGGQTWYNVNQSNEYGRQTFTHEIGHALGLSHPGVYDTRSLMSYSHYAAAPLLDDIAAIQHLYGA--------------- |
8 | 4l6tA | 0.13 | 0.10 | 0.77 | 1.03 | MAPalign | | -TPNEEKKVIGYADH-------NGQLYNIIYVINYTVPITINTRTQLTINYSDYVREAFNEWAPSG-IRVQQVSS-RVVSFSTTNY----------------------------ADNSLGSTIFD-------PSGNSRTRIDIGYIKLKLRITIKHEIGHILGLLHNVARCAPSIMLYDYIDIGPSRNDIEGVRVMR---R-GGSGNFTNRFSC |
9 | 2mzeA | 0.11 | 0.09 | 0.83 | 1.35 | HHsearch | | EAKLKEMQKFFGLPITGMLNGVPPNSPKWTSVVTYRIVSYRDLP---HITVDRLVSKALNMWGKEIPLHFRKVVGTADIMIGFARGAHGDS--------YP-FD-----------GPGNTLAHAFA--PGTG--LGGDAHFDEDELGINFLYAATHALGHSLGMGHSSD--PNAVMYPTYQNFKLSQDDIKGIQKLYGKRSNSRKK-------- |
10 | 1go7P | 0.07 | 0.06 | 0.76 | 1.00 | DEthreader | | GSIDQAAAQIT-RENV-------TNVFGKSANLTFKFLQFVKF----NAEQIEQAKLSLQSWSDVANLTFTEVTKSANITFGNY-TR-DA------------------S--GNLDYGTQAYAYYPGNY-----QGAGSSWYNYNQNEEYGRQTFTHKIGHALGLAHPGAYDSQSICSWGGHYGGAMIDDIAAIQRLYGAN-------------G |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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