Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | YAIEQYDTHGFLKAPIWLWLGWLFLARAWIVFVVAGVSRDSGSQILSFVYPGNTALYLGLAAGVPSIALMWLISLRHPERRWVNALCHIGRWVTLLTAVAQFLQTGYHVYLQHGAFHWTNALTLLILLWLILYVYRSRSVRDCF |
1 | 1qoyA | 0.05 | 0.05 | 0.92 | 1.17 | DEthreader | | --IETADG--ALDYNKYLDQVI-PWQT-FDETIKEL-----SRFKQEYASVVGDIKTLLMDSQDKYFEATQTVYEWCAVDGTKLNEAQKSLLVSSQSFNNASGKLLALDSQLTFLVQNFFTTLSNTVKQANKDIDAALKLTTEI |
2 | 5gnrA | 0.08 | 0.07 | 0.89 | 1.17 | DEthreader | | -PLKHFVL--AKKAIAIFDQLLEFVTEGS-HF----------EATYKNRIATEDDLVEMQGYKDKLSIIGEVLSRRHMKDADAVTKFEQHTIRAKQILATVKNIMDSVNLAAEDEIQNNSKLLRNKAVQLENELENFTKQFL-- |
3 | 6qkcI | 0.04 | 0.03 | 0.89 | 0.68 | DisCoVER | | --------VQVT-TI-GAFAAFGLMTIAISTDYWLYTRGLTHSGLWRILRVRASS-IFPILSAILLLLGGVCVAASRVYKSKRN-IILGAGILFVAAGLSNIIGVIVYISANAGKNHYS-YGWSFFGGLSFILAEV--IGVLA- |
4 | 6gbhC | 0.08 | 0.08 | 0.94 | 1.00 | DEthreader | | -AINQIG--NLNANTQNLIKSAYQAT--LLALKSVGLWNPGYA-IILSFGTEFSAISDMISNAQNIVQETQQLNTPLKSLAQSMLKNAQSQAAVLKLANQVGSDFNRISTGLKNYIEECGVKQLTSLENSNASFSSQ--TPQIA |
5 | 6qkcI | 0.04 | 0.04 | 0.94 | 0.61 | CEthreader | | --------VQVLLTTIGAFAAFGLMTIAISTDYWLYTRGLTHSGLWRICCLEGASSIFPILSAILLLLGGVCVAASR-VYKSKRNIILGAGILFVAAGLSNIIGVIVYISANAGKNHYSYGWSFYFGGLSFILAEVIGVLAVNI |
6 | 3x29A | 0.10 | 0.09 | 0.94 | 0.85 | EigenThreader | | -SGLQLL----GYF--LALGGWVGIIASTALKQSSYAGDAIITAVGLYEGLWQSARALMVVAVLLGFVAMVLSVVGTAKSRVAISGGALFLLAGLCTLTAVSWYVTQEFFNPSTPVNARYEPALFVGWASAGLAML--GGSFLA |
7 | 2pffB | 0.11 | 0.09 | 0.81 | 0.35 | HHpred | | NPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFPGHSQGLVTAVAIAETDSWESFVSVRKAITVLFFIGVRCYETSLPPSILEDSLENLTQEQVQDYVNKTNSHLPAGKQVE--------------------------- |
8 | 5ezmA | 0.06 | 0.06 | 0.88 | 0.28 | MRFsearch | | --------------VFYFLPLVIGGFLPWAGIFPKLWTARFRPALMAGIWAIAIFVFFSISPVIPALGILAGVALDR----LSPRSWGKQLIGMAIVAACGLLASPVVATLNYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVA |
9 | 6eyuA | 0.11 | 0.10 | 0.91 | 0.72 | FFAS-3D | | YEAITAGGFG----SQPFILAYIITAMISGLLFLY---------LPRKLDVPQKFGIIHFFIVVWSGLMYTNFLNQSFLSDYAWYMWMVSTPLILLLLGAEFTLVITGLLAQAQGSITPYYVGVLLLLGVVYLLASSDGLARAY |
10 | 6v3fA | 0.14 | 0.14 | 0.98 | 0.76 | SPARKS-K | | LGSYSRCSRVAVESKATLGLGGVIVVLGAVLAAMGFYSYLGVPSSL---VIIQVVPFLVLAVGADNIFIFVLEYQRLPREAHIGRTLGSVAPSMLLCSLSEAICFFLGAMPAVRTFALTSGLAIILDFLLQMTAFVALLSLDSK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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