Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RKVPEFVKSKLYDGDVSLSQISEELSHAPTKKFPARVFLKIDIDNLPSAVCSRCKLNIAGNRSVRYAGFASSFQTKQKLSPAVGATPESLMPLLETNQKIEKSIAIRDFLKTMEGQWKNQKRLHPLSDEKPTIKNFTLKLTCAIIYSLTPDGRVDMAERIITDKNKGFQNDRNFFGDGE |
1 | 2jolA | 0.07 | 0.04 | 0.63 | 0.58 | DisCoVER | | -----------------------------TGDAKAIRFVDEAV-VAIAFGRQVYEATLCAIFSE-AKDRFCMDPA-----------------------AGNVRPAFIEALGDAARATGLPGPGAGTN------PLYTEIRLRADLMLAARPEYRELQPYAR--QQ--A--IDLVANAL- |
2 | 4a01A | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | | GGGGIYTKAADVAVDNVGDNGDIAGMGSDLFGS--------ANVIG----DGG-DDAGNTTAAIGKGFAIGSAALVSLLFFPLVGVTLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGA-PKGHKVIGDTIGDPLDTSGPSLILIKLM-------------------------- |
3 | 3jacA | 0.06 | 0.04 | 0.70 | 0.46 | CEthreader | | ---------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 6tbuA4 | 0.05 | 0.04 | 0.87 | 0.62 | EigenThreader | | GALGASSAVIVFWYPGLQCLAMAASLAVLLCFTVTVSLSIFNTVAVLILLGESIAV---STAIGLAVDFSLHYGIHYRMSPVKER------LAATQFVLSRIIGPTVMAATTTGLAGGIMMASNIYIQIGVFLVVVMIVSWFYATFFLMSLLRVAG---------------PQHGFLEL |
5 | 2q8gA1 | 0.18 | 0.15 | 0.83 | 0.28 | HHpred | | -GVPGQVDFYARFSPLSMKQFLDFGSVACEK--TSFMFLRKEISLLPDNLLR--------TPSVQQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHN--DVIPTMAQGVIEYKESFDP-VTSQNVQYFLDRF---------YMSRISIRMLL-NQHSLLFG---KHIG--- |
6 | 4c0dA1 | 0.14 | 0.11 | 0.74 | 0.37 | MRFsearch | | --FKKDLDSYLKTRVTFLSDLRSNLQVSNENRYNLQLINA----------------------LVLYVGTQAIAHIHNKTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRY-------------PNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIV--------- |
7 | 6linA1 | 0.13 | 0.12 | 0.92 | 0.57 | FFAS-3D | | AGAPKYIEHFSKPSPLSMKQFLDF-GSSNACEKTSFTFL---RQELPVRLANIMKERVLSTPSVQQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHN--DVVPTMAQGVLEYKDTYGDDPVNQNIQYFLDRFYLSRIS-----IRMLINQHTLIFDGSTNPAHPKHIG--- |
8 | 2zkr5 | 0.13 | 0.12 | 0.91 | 0.53 | SPARKS-K | | -----------ADQEI-ENAVSRALEDAPERNFRETVDLAVNLRDLDLNVDESVVLPAGTGQETTIVVFAETALRAEEVAD-DVLDEDELEELDDAAKDLADDQDIGRYL---GTVLGPRGKMPPLDPDDDMKNTVQLRFHTRVGAEMSAENIADNIDVILRRLHADLEKGPLNIDTVY |
9 | 2z6eA | 0.08 | 0.07 | 0.79 | 0.54 | CNFpred | | --LLHYLITIVENKYPSVLNLNEELRDIPQ-------AAKVNMTELDKEISTL---------RSGLKAVETELEYQKSQPPQGDKFVSVVSQFITV--ASFSFSDVEDLLAEAKDLFTKAV-------FGEEAGKIQPDEFFGIFDQFL-QAVSEAKQENENMRKKKEEE--------- |
10 | 4pl0A1 | 0.07 | 0.05 | 0.75 | 0.83 | DEthreader | | FFMLFITSLSSIIIFCVISNKASVF-FMQYIRNVNISPQISTIVVVTK-DWFSAGVFFLYIL--------------------EDLTQENNAQKKYWLLSSKVLLLNSLLAVILFGSVFIYNILGVVSIGHMITSYIILLSTPVENIGALLSEIRQSM---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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