Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | PAIVHPTKCNVVQQTCEYIVPEIHPTHTTQVTNHVYNHVHSFPHTVSQQQQVYNQQFYQPPGPPTPVAGAMAGPGFGPMAGPGMAGPVAGAMAAPGY |
1 | 2ggoA | 0.13 | 0.13 | 1.00 | 1.05 | CEthreader | | SQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGA |
2 | 3boiA | 0.18 | 0.12 | 0.70 | 1.32 | SPARKS-K | | -----------------------------CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGNCAGGVGGAGGASGGTGVGGGGKGGSGTPKG |
3 | 4oj5A5 | 0.04 | 0.03 | 0.70 | 0.77 | DisCoVER | | -ILYKTQGAVFIDSNGAVNAYISRVAVTQFAGSEVKNSPIIEQADFVHAGGLFMVDKPHI------ESSGGKKKH---------------------- |
4 | 2v7bA | 0.06 | 0.05 | 0.92 | 0.83 | DEthreader | | NF-----AYTLEERASRVRILLVMLDTVAVA-GAAVVPVVANTSQPFEEIAAAAAFWLYSPKT-FAYGNGLFTVFYGVPTSILDGILSNRAAVENG- |
5 | 6sc4A | 0.05 | 0.05 | 0.98 | 1.03 | CEthreader | | GDNNIIGHRALIHGAKINDESIVGAGSIVFNKAEVKTNSMVGMGAVVLEKQEVPNGKIVVGIPARVLRELEEREIKQIKKQADTHAELAEHYSRE-- |
6 | 3bz5A3 | 0.07 | 0.07 | 0.98 | 0.73 | EigenThreader | | EIDVTPLTQLFDCSVNPLTELDVSTLSLTTLHCIQTDLLDLTHNTQLIYFQAEGCRKELDVTHNTQLYLDLSQNPKLTELDVSHNTKLKSLVNAH-- |
7 | 6upkG3 | 0.20 | 0.19 | 0.93 | 0.31 | HHpred | | -CLLQPTSSALVNATEVVTLDEVKVTMINAIPVASLDPIKDLKYTEGVQSLNDPEGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------ |
8 | 2pffA1 | 0.26 | 0.09 | 0.35 | 0.78 | MRFsearch | | -----------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---- |
9 | 3bogA | 0.38 | 0.14 | 0.38 | 0.31 | FFAS-3D | | -----------------------------------------------------------CAGGVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPG- |
10 | 3bogA | 0.10 | 0.06 | 0.65 | 1.19 | SPARKS-K | | ----------------------------------CKGADGAHGVGCPGTAGAAGSVCDGGHGGNGGNCAGGVGGAGGASGGTGVGGRGGKGGSGTPK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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