Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | VMALSVTCASAALAAGQDEAPKPRGKDEAPEAPVACMKAVKAALPNPASFKWVSGKARKVAEDAYSVVADVEYLAQDGA |
1 | 6x4gC2 | 0.04 | 0.03 | 0.68 | 0.59 | DisCoVER | | ANFSVPVVSAPLTF---------------TCTSINGYPRP--NV----YWINKALQNDTVF-LYDVVSVLIGCCIE--- |
2 | 1gr0A1 | 0.14 | 0.13 | 0.91 | 0.83 | DEthreader | | IVGVGCASSLVQGVEYYYNADVRFGPYDVKFAAFVLVSFVNAIVGDD--IKSQSAGIIVRKIKDG--V-AS-YLDARA- |
3 | 2lyxA | 0.10 | 0.08 | 0.77 | 0.52 | CEthreader | | -----------------GEETPLVTARHMSKWEEIAVKEAKKRYPL-AQVLFKQKVWDRKRKDEAVKQYHLTLREGSKE |
4 | 5jqkA | 0.06 | 0.06 | 1.00 | 0.55 | EigenThreader | | DISLSNLMIYKKMKAVKNIDNMKQAHILDGLALLQFFHWCEQKRKTIKPAIYLLDSGGQYLHGTTDVTRTTHFGEPTAE |
5 | 4dsdA | 0.14 | 0.09 | 0.62 | 0.21 | HHpred | | -------------------------TKD-NQLPLPARNFINSNFTKPQVAHIKIDKDE---STKYEVVLEIDFD-SKGN |
6 | 2pffB | 0.15 | 0.08 | 0.51 | 0.48 | MRFsearch | | -----VIVAGTLDINPDDDYGFKQGGGGGGMDLYKTSKAAQDVWN---------------------------------- |
7 | 2o61A2 | 0.15 | 0.14 | 0.92 | 0.28 | FFAS-3D | | ----ARIFKAWAVARGRWPPSSRPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADQHKVYALSGSLSSDS- |
8 | 6xssA3 | 0.20 | 0.19 | 0.96 | 0.76 | SPARKS-K | | EGIIELIRRAREAAERAQEAGDPRVRELARELKRLAQEAAEEVRRDPDS-KDVNEALKLIVEAIEAAVRALEAAERT-- |
9 | 1r0dA | 0.20 | 0.11 | 0.57 | 0.45 | CNFpred | | ----------------------------------QLVAASKVKAKHSPHLSRLQECSRTVNERAANVVASTKSGQEQIE |
10 | 4qvrA | 0.11 | 0.09 | 0.77 | 1.00 | DEthreader | | YVG-SA--IG--T----------NNYVSAQLAFEKALIKAQAEYINLSGLLPIKTFVVEKDGN-AAIGVVVIYS-DK-G |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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