Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VEDRGGASALPYYQSLNPQPDQATPPAPMPAPRVGNAADAEAAMLPVRSTQLSPGDVQRRVIRAPGLTPLFLIGDDERSRAWLRQRQAALRELQAVGLVVNVESMAALTALRRLAPGLTLSPASGDDLAQRLGLRHYPVLITSTGI |
1 | 1kngA | 0.11 | 0.08 | 0.71 | 0.51 | DisCoVER | | RPAPQ---T--AL--PPLE---------GLQAQVPG---LD--PAA---------------F-KGKVSLVNVWASCVPCHDEAPLLTELGK-FQLVGINYKD----AADNARRGNPFGRVGVDANGRASIEWGVYGVPETFVVGG- |
2 | 1o73A | 0.11 | 0.08 | 0.68 | 0.83 | DEthreader | | LAKY---LPGATN--LL--------------SKSGEV---------------------------LVKTVLYFSASCPPCRGFTPVLAEFYEHHFEVVLISWDENESDFHDYYGKM-PWLALPQRVSELGKTFGVESITLITINAIG |
3 | 1kngA | 0.11 | 0.08 | 0.77 | 0.66 | CEthreader | | ----------------------------------RPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKFQLVGINYKDAADNARRFLGRYNPFGRVGVDANGRASIEWGVYGVPETFVVGRE |
4 | 6hraB3 | 0.13 | 0.12 | 0.97 | 0.60 | EigenThreader | | VLFANFAEALAEGRSKAQANSLKGAQRRKTPGNAVSVTVLVALLVCLIPTTIGGLLGANVIATAAGDVDVLLLDKGG-----IKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAATPEAKLALIRQYQRLVAMADVAV |
5 | 3drnA | 0.14 | 0.09 | 0.66 | 0.45 | HHpred | | -------------------------------------------LFEGIA-------DNGEKISLSDIKNIVLYFYTTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKPFILVSDPDKKIRELYGAKGLPFVIDKKGI |
6 | 6oapA | 0.17 | 0.09 | 0.51 | 0.30 | MRFsearch | | -------------------------------------------------------------------RVLLIIDDSPEDRELYRRYLLRDRD-HSYTVLEAGLGRRGLELWQQHHPDAVLLDYRGLEFLAKLQPPYLPVIMIT--- |
7 | 4g97A2 | 0.22 | 0.11 | 0.49 | 0.47 | FFAS-3D | | ---------------------------------------------------------------------LMIIEDEPLIAMDIEQ---MVESLGHEVVGIARTKDEALALYEKEKPRMVLADISGIDAVNEILHNTIPVIITAF-- |
8 | 2lrnA | 0.11 | 0.08 | 0.74 | 0.73 | SPARKS-K | | -------------------------------MSLATGSVAPA--ITGIDLK---G--NSVSLDFKGKYVLVDFWFARKETPYLLKTYNAFKDKGFTIYGVSTRREEDWKKAIEEDKYWNQVLLQVKDVLESYCIVGFPILVDPEGK |
9 | 4nmuA | 0.10 | 0.05 | 0.55 | 0.76 | CNFpred | | ------------------------------------------------------------------GVFLNFWGTCEKEMPYMNELYPKYKEKGVEIIALDADTDIAVKNFVNQYLKFPVAIDKGQKIIGTYGVGPLPTSFLIDKD |
10 | 4pq1A | 0.15 | 0.10 | 0.63 | 0.83 | DEthreader | | ------------------------------------------------------GKTEIFYRAPKDKVVLNAWGQCAPCRSESDDLQEVHEYLTVVGINVRDYSNIAQDFVKDNGITYPSIYDPPFKTAAQLGVPVTTIVLDKQRP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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