>PF11050 (225 residues) MESVQTRLCASSNQFAPFKKRQLAVPVGSVNSLTHTITSTTVTSVIPKNYQEKRQKICHI ISSLRNTHLNFNKIQSVHKKKLRHLQNLLRKKNEIIAELVRKLESAQKKTARRSISKPAH WKYFGVVRCDNTIRTIIGNEKFVRRRLAELCTLYNAEYVFCQARADGDKDRQALASLLTA AFGSRVIVYENSRRFEFINPNEIVSGKRLIIKHLQDESQSDINAY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MESVQTRLCASSNQFAPFKKRQLAVPVGSVNSLTHTITSTTVTSVIPKNYQEKRQKICHIISSLRNTHLNFNKIQSVHKKKLRHLQNLLRKKNEIIAELVRKLESAQKKTARRSISKPAHWKYFGVVRCDNTIRTIIGNEKFVRRRLAELCTLYNAEYVFCQARADGDKDRQALASLLTAAFGSRVIVYENSRRFEFINPNEIVSGKRLIIKHLQDESQSDINAY | |||||||||||||||||||
1 | 2aleA | 0.07 | 0.04 | 0.51 | 0.70 | DisCoVER | -------MSAPNPKAFPL------ADAALTQQILD-VVQ-----------------------------------------QA-ANLRQ--LK--KG--A----------NEATKTLNRGISEFIIMAADCIEILLPLCKV--PY--V--FVPSRVALVIAASITT-NDA--SAIKTQIYAVKDKIETLLILEHHH------------------------------ | |||||||||||||
2 | 1t3tA2 | 0.05 | 0.04 | 0.77 | 0.67 | DEthreader | MKAGFNNGRP-A------------LTGY---------PE-ERCQIDRCWQLG-----TVTGM-VARDQMVGPWQPGLNVKLSFDINED-AAMAAFHFDAIDVHMDLLGVRFETFFHRPQT-LALGVNG---CQMMSRELIPGSEL-WP-RF--VRNH--VTSPSLLLQGMVGSQMPILRYANPNSITAVTENRVTI--------MPH-PERVFRTVAWGEDSP-- | |||||||||||||
3 | 1ry6A | 0.08 | 0.08 | 1.00 | 0.48 | CEthreader | KKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLYENGCVCSCFAYGQTGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKKEVVVKDLKILRVLTKEEILNIDLKDISLGKIAFIDLAGSERGADTVSQNKQTQTDGANNRSLLALKECIRAMDSDKNHIPFRDS | |||||||||||||
4 | 2ygwA | 0.04 | 0.04 | 0.92 | 0.72 | EigenThreader | GTENLYFQSMDELLRRAVPPTPAYELRAA------------GGVLHLRQREAEDRLRYALLFHHISKLDGGVRFLVQLRADLLEAQALNGVLKGMLSEWFMDMKRRVGPYFSHCSTPGEPLVVLHVALTGDIAIFYTQLGTFLIKRVVKELQREFVFSSLSPLMRLCAWYLYGVANFHLQNG-AVLWRINWMALMANYFLEETGPNSTSYLGSK-----IIKASE | |||||||||||||
5 | 2c7jB | 0.12 | 0.07 | 0.56 | 0.27 | HHpred | -----------------------------------------------------LDAFSRVVEQKKGAYLSNDEINALQNKRLDVVNRLTSNASSIVANAYRALVAERPQVF-----NPGGPCF-----------H-------------------------HRNQAACIRDLGFILRYVTYSVLAGLRETYQA--LGT-PGDAVASGIKKMKEAALKIANDPN--- | |||||||||||||
6 | 2byvE | 0.11 | 0.08 | 0.73 | 0.50 | MRFsearch | ------------------------------------------------YALNNKRRVIRLVLQWAAMYGDLLQEDDVAMAFLEEFYVSVSDDARMMAAFKEQLPELEKIVKKRQPIRGSDEVLFKVYCIYTTIRVPVSVKEVISAVADKLGSG--EGLIIVKMNSVLKSNDVSVFTTLT--INGRLFASLTVGTFELMSSKDLAYQMTTYDWELFNC-------- | |||||||||||||
7 | 6nlyB | 0.11 | 0.07 | 0.68 | 0.69 | FFAS-3D | ------------------------------------------------EALRLSKDIGRLIEAVETAVMPQWQRRELLATVKMLQRRANTAIRKLQMGQAAKKTQELLERHSKGP---------------LIVDTVSASLSVLVKVVRQLCEQAPSTSVLCQVAQGAMPTAEAWALAVCSHMGSRVVAQGTGSTTDL--EAALSIAQTYALSQLLEH-------- | |||||||||||||
8 | 6w2vA | 0.12 | 0.11 | 0.88 | 0.56 | SPARKS-K | -ATDKEEVIEIVKELAELAKQS------TDPNLVAEVVRALTEVAKTSTDTELIREIIKVLLELASKLRDPQAVLEALQAVAELARELAEKTAKECAEAVSAAAEAVKKAADLLKRHPGS-----------------EAAQAALELAKAAAEAVLIACLLALDYPKSDIAKKCIKAASEAAEEASKAAEEAQRH---PDSQKARDEIKEASQKAEERAQEHPNAG | |||||||||||||
9 | 6k0zA | 0.11 | 0.08 | 0.70 | 0.54 | CNFpred | --------------------------------------------------SFRKEQLKKLSKAIKSY---ESDILEALYTDLGNKVEAYATEIGITLKSIKIARKELKNWTKKNVDTPFPTKSYIKKEPYGTVLIIAPNYPFQLVFEPLIGAIAAGNTAIIKPSELTPNVARVIKRLINETFDANYIEVIEG---------GIEETQTLIHLP------FDYVFF | |||||||||||||
10 | 5nrlA | 0.07 | 0.06 | 0.82 | 0.83 | DEthreader | LFSEVKVSEEIKKFDSRIRGILM-------ASGSTTFTAANTLI-FTREAIVLLILVKGETRIQNRVKLGLNSKGKIPTLKISLIQIFRHLWQKIHESIVFDQTFSSKNRKSAIANTLLYLRL----------------KN--IYVS-AD-DFVEVYVLPKLKKEISD-VAAFIYGKTVTEGLELLGWIHTQISAYNL----AQ-LLLSDRITG-----NFIYG- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |