Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MLDWRLVSAHFILAVILMLWSSGKVLSVDVATEAFDSGVIDVQSPPTVREEKSASDLAAKLLLLDELVSLENDVIETKKKRSFSGFGSPLDRLSAGSVDHKGKQRKVVDHPKKRLGIPIDRIGRNRLSNSRG |
1 | 5vy9A1 | 0.10 | 0.08 | 0.83 | 0.59 | DisCoVER | | -QFTERALTILTLAQLASDHQHPQLQPIHIAQNLIEKGRYDYDLFKK----VVNRNLV-RI------------PQQQPAPAEITPSYALGKVLDAAIQKQQKDSFIAQDHILFASIEAQVDIAIKQQA---- |
2 | 4akkA | 0.05 | 0.04 | 0.74 | 0.83 | DEthreader | | HQLAQQGTLAGQISALVHMLQCEGLVQLTRFYAALEPARAALWRACA--VWYLLRIIRHLLNIVPQMVYSFSFQQTLFQLRGV-----EELLIDLNAA-----------QLLPRAH---------------- |
3 | 3ihyC | 0.11 | 0.11 | 1.00 | 0.41 | CEthreader | | RESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTY |
4 | 7jv4A2 | 0.06 | 0.06 | 1.00 | 0.47 | EigenThreader | | RSFIEDLLFNKAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVL |
5 | 3zrgA | 0.27 | 0.06 | 0.23 | 0.24 | HHpred | | -----------------------------------------------LKAGMTVDDYAAKLKLTDKIAAAANSARAM------------------------------------------------------- |
6 | 6vwuA1 | 0.16 | 0.07 | 0.42 | 0.33 | MRFsearch | | ---VEFLNRWITFSQSIISTLTG----------------------GSSSTKKTQLQLEHLLLDLQMILNGINNYKNPKLTR--------------------------------------------------- |
7 | 5gufA | 0.19 | 0.14 | 0.71 | 0.41 | FFAS-3D | | AVDWRIDNILEAIILMLPAMIANATPVVAGGRRPVDMGVVLPDGRRLLGDGKTIEGLLAGFAPAIALGALAGDMAGSKRRLGIERGRPLLDQLD-------------------------------------- |
8 | 5yfpE7 | 0.11 | 0.10 | 0.88 | 0.95 | SPARKS-K | | KKKQNYIQSVELIRRYNDFYSMGKLRLSKNWKLNLKSVKLMLILSSKLETSSIPKTINTKLVIEKYSEMMENELLENFNSAYRENNFTKLNEIAIILNNFNGG-VNVIQSNQHDYFI--------------- |
9 | 1e6vB | 0.20 | 0.07 | 0.33 | 0.54 | CNFpred | | MDLWNAYAAAGLVAAVMVNQGAA----------------------------RAAQGVSATILYYNDLLEYET------------------------------------------------------------ |
10 | 6rw9A | 0.08 | 0.07 | 0.85 | 0.83 | DEthreader | | RQEWEIQKNNAESEIRQIDAQLEALAVRRTATEMQREHEIQAQAEFRKFNAL-SWLRGRLASIYYFYAGLMAGESLLLNLAE---------QAWLKRDSSGTTRRI---YGG-----NSLPAGC--RWLEGT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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