Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KYSSKINKIRTFALSLIFIGFIVMYGGIFFRNSPIIMTIFMILGLLCIVASTVVYFWIGMLSTKTVQVKCPNCGKATKILGRVDICMHCNEPLTLDKNLEGKEFDEKYNRK |
1 | 6a70B | 0.05 | 0.05 | 0.83 | 1.00 | DEthreader | | AARWLLVALTAATALVRLAQLGAADRQWTRFRRPRRFT-SFDQVAQLSSAARGLAASLLFLLLVKAAQLR-VRQWS---------V------K-LCR-ALEILRYHALRGY |
2 | 4epoG | 0.05 | 0.05 | 0.95 | 1.33 | SPARKS-K | | -----QEHWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELEYFIEAVTLNCAHSFEWMKRKIECPICRKDILVLSSEVKERRIVLIRER |
3 | 4nqiA | 0.06 | 0.05 | 0.76 | 1.00 | DEthreader | | LFTEVIKAANKYQQQAQALSQAGLVLADTLTLFKKLADAIKDLENRRDDVAKVLLNEITPNKQAIED---------DQK---AIFE--KNYK------------NKRDV-V |
4 | 4avmA | 0.08 | 0.06 | 0.78 | 1.00 | DEthreader | | NFYQQQAEGHKLYKDLKNFLSAVKVMHESSKSEVWNNDLWEDYEEKLADAVRTMEIYVAQFS--EIK----------ERIARGKLVDEKAQFENLLEEL------------ |
5 | 5nl2A3 | 0.15 | 0.14 | 0.90 | 1.26 | SPARKS-K | | AYFTNLVSIIFMIAVTFAIVLGVIIYRISTAARVTVTATAVIINLVVIILLDEVYGCIARWLTKIEV---PKTEKSFEERLTFKAFLLKFVNSYTPIFYVAFF-------- |
6 | 3ok8A | 0.06 | 0.05 | 0.77 | 1.00 | DEthreader | | LGNNYLRAFHALSEAAEVYFSAIQKIGEQALSSQILGEILVQMSDTQRHLNSDLEVVVQTFHGDLQEKTKLDMQF----------I--K-S-----------A-ELKRRYR |
7 | 2hr5A2 | 0.09 | 0.08 | 0.86 | 0.70 | DisCoVER | | -LGKTPENLQMGIEGETFEVEEYPVYNKAAEGEKEAVRTTHYALEAEKIHAELYRKAKEKAEEIKKVYICPICGYTAVDE-APEYCPVCGAPKE------------KFVV- |
8 | 4wjgE | 0.07 | 0.06 | 0.90 | 1.00 | DEthreader | | VIYRTTERHSVQVEAHKTAIDKHADAVSRAVALTDRLALFNNETQAVLTARDHVHKHRAAALQGWSDAKG---DAA--------AEDVWVLRYSSTSETLQKDAAGLSHKK |
9 | 2hr5A2 | 0.09 | 0.08 | 0.88 | 0.87 | CEthreader | | -LGKTPENLQMGIEGETFEVEMYPVYNKAAEGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKIKKVYICPICGYTAVDE-APEYCPVCGAPKEKFVVFE----------- |
10 | 6hwhA | 0.07 | 0.07 | 0.96 | 0.58 | EigenThreader | | PGTKAEKRTERLVAYWLMLGGLSGLALLLVFLFTPLYGLTFGLSILSIGIGAVLFQKKFKGQESFNFYTKVCSCPSSLYETYRILCPCHQSQFEFAKPIFGPAA----RAL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|