>PF10972 (247 residues) LFTFLSCLIFGSLSAEDRTYDVEMIIFENSRAPISNTNYWKPEILVPNLSNTLAFPGDEA AEGHPSAPSAASKQQFIKLKSDTYFLNTQKQALSRSSRYNVLTHLRWRQPGLAKANALPL RIKAGTPFPLYLLSQPGHSLSTTTKPEKNFFFARDRQPELSELVSPIQGYPLDGSVTIYL GRYLHIVTDLILTLPTPESLPVSTGTIQESDVRLGKQSYRLNIHRRMRSKEIHYLDHPKF GLIVYIE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | LFTFLSCLIFGSLSAEDRTYDVEMIIFENSRAPISNTNYWKPEILVPNLSNTLAFPGDEAAEGHPSAPSAASKQQFIKLKSDTYFLNTQKQALSRSSRYNVLTHLRWRQPGLAKANALPLRIKAGTPFPLYLLSQPGHSLSTTTKPEKNFFFARDRQPELSELVSPIQGYPLDGSVTIYLGRYLHIVTDLILTLPTPESLPVSTGTIQESDVRLGKQSYRLNIHRRMRSKEIHYLDHPKFGLIVYIE | |||||||||||||||||||
1 | 4i0wB | 0.04 | 0.03 | 0.81 | 0.72 | DisCoVER | NISLSTSH-NGSSEKYIQTTQLQKAVIVV--------AAGN-EGNSAHHVGGKKKEEDLDLNIIILDFFKPVLVDVSVEVISP----------------TGISTGPIELS----ESYKERFVGREKIVVYSTGPDIQGQTTISILTSGGWRIIVRKGYFDIWLPNERTRFLQPSVYNTLIPATVEGVISVGSYN---------------FLNNNLSAFSGRGVEWLIKPFDTKSGTSAAVSCFLYG- | |||||||||||||
2 | 5fguA | 0.06 | 0.04 | 0.64 | 0.67 | DEthreader | VVPIGEGTLKFICTTGKLVWLVFVQCFARYPD----------------------TIF--FK-------DD--GN--YKT---RAEVKFEGDTLV----------IELGNILHKLEYNYNSHNVYIMA--------------DKQKNG-IKVNFADHYQQN---VLLPDNHYLSTQSALSKDEHMVLLEFVTAAGINFYGIIMIDANLIVHVYYKATPVYQGSE-SL--------------------- | |||||||||||||
3 | 6d6tB | 0.11 | 0.10 | 0.95 | 0.74 | CEthreader | VKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNL------------MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHAHACPLKFGSYAYTRAEVVREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC | |||||||||||||
4 | 5wq7A4 | 0.09 | 0.04 | 0.49 | 0.95 | EigenThreader | ----------------RAQVLVEAIIEVQDGNN----------------------------------------------------------------KNDILATPSIVTLDN-----KLASFNVGQDVPVLS-------------------------------TVERKTVGTKLKVTPQVNDAVLLEIEQEVSSVDSSSNSTLG---------PTFNTRTIQNAVLVTGETVVLGGRAKRNVFIRPT | |||||||||||||
5 | 4hc4A2 | 0.13 | 0.07 | 0.54 | 0.26 | HHpred | ---------------------SEIVV-QGLSGEDVLAR--------PQRFAQLELSR---------------------AGLEQELEAGVGGRCSCYGSAPMHGFAIWFQVTFPGGE-KPLVLSTSPFHP------ATH--------WKQALLYL------NEPVQVEQDTDVSGEITLLPSRRLRVLLRYKVGDQEE-----------------KTKDFAMED------------------------ | |||||||||||||
6 | 4q35A | 0.06 | 0.03 | 0.52 | 0.72 | MRFsearch | -------------------ERFNISVGQIY-----------------------YFTESRTGDDNITWENDDKT-----------------------GSLVWAGDTYWRIS-------ERWGLRGGIQYD-------------------------------------DNVATSNSSIEYRRDEDRLVQLNYHYASPEYIQATLPKYYSTAEQYKNGISQVGAVASRPIA---------DRWSIVGAYY | |||||||||||||
7 | 5foyA2 | 0.07 | 0.06 | 0.76 | 0.39 | FFAS-3D | -------------------------------------------PSLPENEQYPKTPVLSGIDDIGPNQSEKSIIGSTLIPCIMVSDFSLGERMKTTPYYYVKHTQYWQSMWSPPGSKETKTEKSGITDTSQISMTDGINVSIGADKTFGIKGGFTYDTKTQITNTSQLLIETTYTREYTNTEGYVLASEFTLHRSDGTQVNTIP--------------WVALNDNYT--TIARYPHFASEPLLGNTK | |||||||||||||
8 | 1wxrA3 | 0.09 | 0.09 | 0.94 | 0.69 | SPARKS-K | DVNGNSLTFHQLKAADYGA---VLANITLDYALRADKVALNGWSESGKGTAKYNNPYTKQSTYGYFPTDQSSNATWEFVGHSQGDAQKLVADRFNTAGYLFHLNVDNRLPEGVTG---ALVMDGAADISGTFTQENGRVIHAYNTQSVADKLAASGDHSVLTQSFSQEDWELKNT-DFGLGRNATLNTTIQADNKNDGQGTAFTLEEGTSVATKDADKSVFNGTVNLDNQSV---------LNIGIQ | |||||||||||||
9 | 6lveA | 0.07 | 0.04 | 0.61 | 0.69 | CNFpred | -----IRFYVSANET-RGTFDAELVRLIHGDSN--AGPGYKEEAIKSDLEGQYPARFQRT------------FGSYVEVADPDAGLQPD--------GAFSVHLFLWSTTP-SRGRQGIASRWND---------------------------------------------ERQSGWNLAIE---DGRVVFTIGDGS-------------------GATSSVVSDRPLFQQIWYSITGVYDQLRLYQK | |||||||||||||
10 | 4ijyA | 0.04 | 0.03 | 0.68 | 0.83 | DEthreader | -----IRGCPT------LETPLKLTFTEDIQ-PRKEYYDGWRTEHEIHI-YVEFQTPS-----K-GYSYIDANGVMYTNGEY-----------W--NKGQT-KSIYLPGRD-----FKTVEVFHFQNNRPQWDDRN---N----------------------HDD-TDSLFLYQKLSRASLKESQINYYQLRGKFNGVN-------------W-QEYIMEDNGSFKALKIESLDLRLMIASFNRTDF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |