Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SGSDSRSEPSQLSDRDLVESVLRDLSEAADKWEALVTQAETVTYSVDLGDVRAVANSDGRLLELTLHPGVMTGYAHGELADRVNLAITALRDEVEAENRARYGG |
1 | 1pugA | 0.14 | 0.12 | 0.81 | 1.00 | DEthreader | | --------------MK--QA-QQMQEKMQKMQEEIAQLE--VTGESGAGLVKVTINGAHNCRRVEIDPSLLED-DKEMLEDLVAAAFNDAARRIEETQKEKMAS |
2 | 5ochA1 | 0.10 | 0.09 | 0.85 | 1.00 | DEthreader | | ALNVQPLLLGQLLSTHLLILYGVQGLLTFGYLVLLSHVGRMADM-------RRA---------LFSLLRQIFDNKTGQLVSRTTDVQEFKSSFKLVISQGLRST |
3 | 1pugA | 0.12 | 0.10 | 0.79 | 1.02 | HHpred | | ---------------------MKQAQQMQEKMQKMQEEIAQLEVTSGAGLVKVTINGAHNCRRVEIDPSLLE-DDKEMLEDLVAAAFNDAARRIEETQKEKMAS |
4 | 5yrxA | 0.21 | 0.12 | 0.56 | 0.93 | DisCoVER | | -------------------------------------ANSEVHGQAGGGLVKVVVKGSGEVIGVTIDPKVVDPDDIETLQDLIVGAMRDASQQVT--------- |
5 | 1pugA | 0.12 | 0.10 | 0.78 | 1.02 | MRFsearch | | ----------------------KQAQQMQEKMQKMQEEIAQLEVTGEAGLVKVTINGAHNCRRVEIDPSLLE-DDKEMLEDLVAAAFNDAARRIEETQKEKMAS |
6 | 1pugA | 0.13 | 0.11 | 0.81 | 0.85 | SPARKS-K | | --------------MKQAQQMQEKMQKMQEEIAQ-----LEVTGESGAGLVKVTINGAHNCRRVEIDPSLLED-DKEMLEDLVAAAFNDAARRIEETQKEKMAS |
7 | 2po1A | 0.13 | 0.12 | 0.96 | 0.95 | MAPalign | | PFSVEERKKPGPDRRSIEISKVIKGALEGITAASLALADLVAACAAGKADVPVAIMPLKNITLLQMD--GY--LTKDEFIEAVKLAIKGAKAVYQKQREALKEK |
8 | 1pugA | 0.14 | 0.12 | 0.81 | 0.92 | CEthreader | | -----------------MKQAQQMQEKMQKMQEEIAQL--EVTGESGAGLVKVTINGAHNCRRVEIDPSLL-EDDKEMLEDLVAAAFNDAARRIEETQKEKMAS |
9 | 1pugA | 0.15 | 0.12 | 0.79 | 0.92 | MUSTER | | ---------------------MKQAQQMQEKMQKMQEEIAQVTGESGAGLVKVTINGAHNCRRVEIDPSLL-EDDKEMLEDLVAAAFNDAARRIEETQKEKMAS |
10 | 1pugA | 0.13 | 0.11 | 0.79 | 1.52 | HHsearch | | ---------------------MKQAQQMQEKMQKMQEEIAQLEVTSGAGLVKVTINGAHNCRRVEIDPSLLE-DDKEMLEDLVAAAFNDAARRIEETQKEKMSG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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