Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MLCIFYIARLCNLIIYSLYSLLMFPMQKLISFMFGNLNPFDSVLDKDEKIQDNINTNHKPIESKEINNDLPLTVLDKKDTSDINIRNDNGVFDFIKIPNPFKKHYEYYCNQNTIKEPPRKGLVERMMNMVE |
1 | 6u6lA | 0.10 | 0.06 | 0.64 | 0.59 | DisCoVER | | -----SKVSEQLKC-CSGIL-----------EMFHAYAPFYKPVDYCDII-KHPMDMSTIKSK--LYR-D-AQEFGADV---RLMFSNCKYVVAMAKLQVFEMRFAKMP---------------------- |
2 | 6bfiA | 0.02 | 0.02 | 0.79 | 0.83 | DEthreader | | EIRKALAERVATDFVNVGGPIKFEAHTARLADTAELVASALRKE-------AKL-------------------RDITAVALVKEKWLEAAESMGRSVGVIDSLEFMKVSARIQA--VAQANRVIQVAKVED |
3 | 4ic4A | 0.05 | 0.05 | 1.00 | 0.43 | CEthreader | | PDPITFVSAFAISFLSIYRDKTRTLRKPFLIREDMGFRLISEKVSHRPPVFAFFAEHLDWECSYTVTNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYMEPVNEFEVHSSKGDKSHILFDKAGMFSGR |
4 | 6li9B | 0.04 | 0.04 | 0.98 | 0.45 | EigenThreader | | GLISGISIIVGTIISPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWASLIVIKPTSFAIICLSFS---EYVCAPFYVGCKPPQIVVKCLAAAAILFIST |
5 | 6wb93 | 0.10 | 0.04 | 0.37 | 0.27 | HHpred | | ---VRWVSS------ISWYFISVLGLNPVYNLIGLN-----DQQVDKMANDLTII-QHETCLD-------------------------------------------------------------------- |
6 | 2oarA | 0.12 | 0.05 | 0.40 | 0.33 | MRFsearch | | --LNVLLSAAINFFLFAVYFLVVLPYNTLRKKG-----------------------------------------------------------------------------EVEQPGDTQVVLLTEIRDLLA |
7 | 2r6gF2 | 0.09 | 0.09 | 0.98 | 0.47 | FFAS-3D | | -ITTLILSSAGLYIMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTFERAQEVLLDRSWQAGGTQPLYTLDGDGTLTNNQSGVKYRPNNQIGFYQSIKLSPGYTVTTGWKNFTRVFTQDFLAAAIATLIFLL- |
8 | 5yfpC2 | 0.12 | 0.12 | 1.00 | 0.78 | SPARKS-K | | TYDIVEMARLAIRLFKIYDLEEREDLRIEAIRNIIKKKEIEIEKSSIKKLPNSKNTARLQDETPKVIEYPTNKGLYMSGTISTRTAPRGYKHFLINISEMFGEMREKYVGDQKFDLDNMDWIFNELIIVKE |
9 | 3v0aB | 0.09 | 0.02 | 0.27 | 0.53 | CNFpred | | --NTAYFKKIYYNFLDQWWTQYYSQYFDLICMAKRSV---------------------------------------------------------------------------------------------- |
10 | 5f0oA | 0.06 | 0.05 | 0.86 | 0.83 | DEthreader | | TLKMWGKALIDAVAGLVHLRSACFNLAFSSFYANR------SKHLTVRNAVSELFKRLELFRKNIK-I--ESRFTRDNFSTVFRVIYRAAPIIFNIIKPGTYKIS-K-T--FFFQKLYGEKYA-E--Y--S |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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