>PF10915 (238 residues) VVITDEQKKMLEQFLDENRPAELINTYLHFIESKFQLQPVLFPKDKIIYQSAEDCIKNLE REGKLWHETEIKIGFGHASVNEETKKVYICPFTGKVFGDNTHPNPQDAIYDWVSKCPENT ERIGGLRVKRFFVSEDPEVIKSYIDKTKSRRDAIKKVVYSSVLSGKLFNSKEAVIEDFKR NYLKKLSLVEVQIQNKFKIEDHFLAFIQKHLVEDKIASFVEALAEFDEFLPYVERWVE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | VVITDEQKKMLEQFLDENRPAELINTYLHFIESKFQLQPVLFPKDKIIYQSAEDCIKNLEREGKLWHETEIKIGFGHASVNEETKKVYICPFTGKVFGDNTHPNPQDAIYDWVSKCPENTERIGGLRVKRFFVSEDPEVIKSYIDKTKSRRDAIKKVVYSSVLSGKLFNSKEAVIEDFKRNYLKKLSLVEVQIQNKFKIEDHFLAFIQKHLVEDKIASFVEALAEFDEFLPYVERWVE | |||||||||||||||||||
1 | 2mr6A | 0.18 | 0.07 | 0.41 | 0.71 | DisCoVER | ---------------------------M--GV------VILVLTGDEIAEEL---RKEV---QKHDNVKTV-P------------TKKVKAGRPIVVFVRGDERAKDIAEYAQ----------EGLRVIVIIVSYDVYTSRNED-------EAKKKLKALSGS-----------------LEHHH----------------------------------------------------- | |||||||||||||
2 | 3faqA | 0.05 | 0.04 | 0.69 | 0.67 | DEthreader | RALARWLPA------SIVGYLDFMQWGQIVDHD-L-D-FA-PETE-----------------------------GSNESAGFPTQINA-----------VTSFLDASLVYALRLMAVNLPFNNKKSPCFAGDF--------------------ASEQLLAH-FIIITFRDLPIVLG-GEKKSKTELLFQPTHGFDLAAINLQRCDIWIGGNMVPLLACLLGRQFQQIRDGDRFWWE-- | |||||||||||||
3 | 5v3gD | 0.12 | 0.09 | 0.71 | 0.56 | CEthreader | -----PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTG--------------------EKPYVCRECGRGF---RDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKP------------YVCRECGRGFRDKSNLLSHQRTHTGEK-PYVCRECGRGFRNKSHLLRHQRTHT--------------------------- | |||||||||||||
4 | 7c4jA | 0.07 | 0.06 | 0.82 | 0.70 | EigenThreader | IPDHLAELI--------------------PELYSFQQLVFIHLRNLH----MKRMVAQWERSKLSVKFLRIFISNVSEKFSSFIESIVVDFKLESVKWQYFD-----------------GLDIKNVECTISILRKSSLINSTHLVDKASTYGELVLDIEVPDLKFNNTQRESQIGAAELNENAR--ELEQIKPKIALQDKEITSVLSNLHESNKRYRFFKKISEDPVKALNECIASTS | |||||||||||||
5 | 1oltA1 | 0.13 | 0.10 | 0.75 | 0.32 | HHpred | ------------------WDLALIKY--------YTSYPTALEFSE--DFGEQAFLQAV-ARY---PERPLSLYVHIPF------CHKLCYFCGCNKIVTRQQQYLDALEQEIVHR---APLFAGRHVSQLHWGGGKAQISRLMKLLR-ENFQFNDAEISIEVDPREIE--LDVLDHLRAEGFNRLSM-GVQDFN-----KEVQRLVNREQDEEFIFALLNHAREIG-FT-------- | |||||||||||||
6 | 4a8eA | 0.12 | 0.09 | 0.75 | 0.47 | MRFsearch | ---ARDALRFLAKLKRKGYSTRSLNLVIQALKAYFKFETPKMPKTLPKSLTEEEVRRIINAAETLRDRLILLLLYGVEDVNFEYGVIVVRGGK-------------------------------GGKDRVVPISESLSEIKRYLESRNDD----SPYLFVEMKRKRKDKLSPKTVWRLVKKYGRKA--------TPHQLRHSFATHMLERGSTKHLKEAVKKAK-------------- | |||||||||||||
7 | 1kw2A1 | 0.10 | 0.08 | 0.79 | 0.54 | FFAS-3D | -----YEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTF-----EQVSQLVKEVVSLTEA----------------------------C------CAEGADPDCYDTRTSALSACESNSPFPVHPGTAECCTKEGLERKLCMAAKHQPQEFPTYVEPTNDEICEAFRKDPKEYANQFMWEYSTNYG--QAPLSLLVSYTKSYLSMVGSCCSASPTVCFLKERLQLKHLSLLTTL--- | |||||||||||||
8 | 4bj1A | 0.15 | 0.13 | 0.89 | 0.67 | SPARKS-K | HVFYQKFKSMALQELGTNLSISYVPSLSKFLSKNLMKNCIVFFEHIHQYAGIDRAVSETLSLVDI---NVVIIEMNKINNDESIDHIVYFKFEQL---DKIEPSKLTEFINVLSVLEKS----NNIAFKVLIYSNSSLLSTSLKKKLNTK-----YTVFEMPIL-----TCAQEQEYLKKMI--KFTFD---SGS--KLLQSYNSLVTCQLNNKNLAIFFEFLKVFPHPFTYLFNAYT | |||||||||||||
9 | 5iwiA | 0.11 | 0.10 | 0.88 | 0.77 | CNFpred | -----ELINGVLSLSKNPISIAELMEDIE---------GPDFPTAGLILG-KSGIRRAYET---GRGSIQMRSRAVIEERGGGRQRIVVTEIPFQVNKA----RMIEKIAELVRDK---IDGITDLRDERVVIDVASVILNNLYKQTP--QTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALD--HIDEIISTIRESDTDKVAMESLQQ | |||||||||||||
10 | 4lglA2 | 0.05 | 0.04 | 0.78 | 0.67 | DEthreader | PYQAEIAQGRLEALLFIHAAICTAQVL-LALNMIPMKLNA------PVWFGIPTGYQILFAQLEA-LGEITG-----------------GEY-GLQV---YHLSRGEEQRNICLI-PAAVM-----CGMQALMVTYSVFEATIGTICD----DFGAVCHLNGMGPIGLPRTSMISAAPYGSASILVIS-MYIAMMGLKATEAIAHECIPTVWPVLDRHVCSEGME------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |