>PF10899 (189 residues) QTFVPRYCFEEIKLSDELERPGFESAIPMVCFCDISLSQMANHIKMYGGYGLGMTKEWGI RKKLNPIIYVNPNSNISESVSQMAENIYQALDKHCSEITGNIFDEYMNLLNFLKPYDGDF KRGNKTHKKVRFYNEREWRYVPKIEFDSEVKNNLTKEEFLNPTILENENKKLFEYRLGFK PSDIKYIFV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | QTFVPRYCFEEIKLSDELERPGFESAIPMVCFCDISLSQMANHIKMYGGYGLGMTKEWGIRKKLNPIIYVNPNSNISESVSQMAENIYQALDKHCSEITGNIFDEYMNLLNFLKPYDGDFKRGNKTHKKVRFYNEREWRYVPKIEFDSEVKNNLTKEEFLNPTILENENKKLFEYRLGFKPSDIKYIFV | |||||||||||||||||||
1 | 6m4pA | 0.05 | 0.04 | 0.72 | 0.62 | DisCoVER | CPFDPLARPLTRMEFPN-GHVGWLATGHAVVRAV-------------------L---A-----DPRFSHRNR-RHWPLADINMLALGTWLRERPADRAVEELMRYMSVVHTGSRAALEDVELAGEVV-RAGESVA-FSVQAA-------N--RD----P-----A--RFADPDGHLGFGYGVHQIPYG- | |||||||||||||
2 | 6n56A | 0.08 | 0.06 | 0.71 | 0.67 | DEthreader | -------------TVKGS-DWG---------LAFIAVYVS-TLL-ATGGICDAGAS--ET---GVAKLGNM-----A-VQFSRDVVSRRILEHIHPIKP--MQ-HY--SM-GGVRTNKGAGSEVVMIDYFA-H--------IRERMKEVMDEKVGVFRE-G-KKLEEALKELQELYSIELEAYRTKML- | |||||||||||||
3 | 5ur2A2 | 0.06 | 0.05 | 0.84 | 0.51 | CEthreader | YARHMRELQKPLRVGGLPGELSHYIYKSRGVTAVIAPWN-------FPLAILAGMVTAAAVAGNTVVMKPAE--QSTVVAWGLMKMIQEAG--------------FPQGVINFLPGYGE--------EVGEYIVNHKYTTTIAFTGSKAVGLHIMNRAAVVQPGQQHVKRCIIEMGGAMVDRHPFGGFK | |||||||||||||
4 | 2r55A | 0.06 | 0.04 | 0.69 | 0.58 | EigenThreader | NGVSVSWRPSV----------EFPGNLYRGEGIVGTLEEVWDCVKP--GGL------RVKWDTGFEIIQSITDTS-------------------AAMKLISP--------RDFVDLVLVKRYEDGTISSNATHVTNLVTFFH--------TDLSGY--L-PQNVVDSFFPRSMTRFYANLQKAVKQE-- | |||||||||||||
5 | 1mw7A2 | 0.19 | 0.08 | 0.41 | 0.22 | HHpred | ---------SEITYEGKA---NFGVLIIMECMTDNPIANLKSYFNKTQGASIVPSLEFMFNIATTPIE---LNDEQMELTEKLLDRIEDDDD------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 3ssmA | 0.12 | 0.08 | 0.66 | 0.40 | MRFsearch | -----------------------------------SLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGD--QNDAEFLDRIARRYGPFDIVIDDHINAHVRTSFAALFPHVRGFGGQADPQECSGTSLGL----------------------------LKSLIDAIQHQELPSDPGYVDRNIVGLHV | |||||||||||||
7 | 2q02A | 0.07 | 0.06 | 0.86 | 0.39 | FFAS-3D | ------------------NIEKTRFCINRKIAPGLSIEAFFRLVKRLEFNKVELRRNLAEKYGLEIVTINQLTEEVVKKTEGLLRDAQGVGNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQLIREAGSPFKVLLDTFHHHLYEEAEKEFASR--------IDISAIGLVHL | |||||||||||||
8 | 6wvsA | 0.10 | 0.08 | 0.83 | 0.60 | SPARKS-K | --------DILIVNATDVDEMLKQVAKQIAVVSD-DWRILQEALKKGGDI-LIVNVEILRRLGAKQIAVVSDD-------WRILQEALKKGGDNATD-VDEMLKQVEILRRL-------------GAKQIAVVSDD-WRILQELKKGGDI-LIVNATDVDEMLKQVEILRRLGAKQIAVDWRILQEALK | |||||||||||||
9 | 3e96A | 0.07 | 0.03 | 0.43 | 0.51 | CNFpred | --------------------------LVGVKYAINDLPRFAKVVRSIHQIAWICGT-FFWHAGAKGFTSGL-VNLLPQKAVEMLEALRNN----DNDAVWRIWEDIVPFEDLRG--------------------------------------------------------------------------- | |||||||||||||
10 | 3mk4A | 0.08 | 0.06 | 0.78 | 0.83 | DEthreader | QFNQNVLMLLALQL---DLISTRVAVTCMVLVQIILADVQQQYLSSI-------------------HLLGDGLTELITVIKQAVQKVLGSVSHLDLEQKLKEIRNLVEHLLSYMMP-----------------LLTRLFSLNTCNRGFSRLLNGQIHSVCSET-PSHFVQDLTMEQVDFNVYEAFST-- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |