>PF10887 (276 residues) MSMPLSNALQSQIITDAHFLHHPIVDSEFTRKLKYARMDSENIYLPPLTRGNNHNYDGKS VVEIRKLDISKEPWPFNYVTGACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAT TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPASQAKRWTN EQPRIDIYIDQIMTVTGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYK VIPGDENAPLKRMTLQPSSLPELFELKNGEWNYIGK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MSMPLSNALQSQIITDAHFLHHPIVDSEFTRKLKYARMDSENIYLPPLTRGNNHNYDGKSVVEIRKLDISKEPWPFNYVTGACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHATTELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPASQAKRWTNEQPRIDIYIDQIMTVTGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYKVIPGDENAPLKRMTLQPSSLPELFELKNGEWNYIGK | |||||||||||||||||||
1 | 3s7eA1 | 0.07 | 0.04 | 0.55 | 0.58 | DisCoVER | --PRFS--T--RYGNQNGRIRV--LQ--RFDQRSRQFQNLQNHRIVQIEA----KP--NTLVLPKHA----------------------DADNILVI----------QQGQATVTVANGNNRKSFNLDEGHALRI-------PSGFISYILNRHDNQNLRVAKISMPVNTP--------GQFEDFFPASSVIVKVSKVLT-KHA--GD--ITNPINLRE--------------------------------------------------------- | |||||||||||||
2 | 6z16A | 0.07 | 0.05 | 0.72 | 0.83 | DEthreader | PTLAYFLSYIDDVDEVIRA-----------------TMPWISFDAYVDGL-----------SLLFLIIGVVSFYVYLLFMGAMYMFWELSIFLIAGAQKSLITMFGGLLMLGGAVILFGAFTKQFFYIWLPAMEA-PTPVSAYLSAT-----------------MVKA-----------------IYVIARTPIFAVSSVWVWTVALVGLVTLCWALASSQLILLGGSFGENVFM--VA--V-----LAAIFHLHKSMAGKEFFM----AILPAPE | |||||||||||||
3 | 7byyA | 0.11 | 0.07 | 0.61 | 0.52 | CEthreader | ------------------------------------------------------------------------------------------TLPIVLSCNYQSDITYPGQKQFDCGNPVIDKFVRASLKKSVR-------NSDCAAKALIDRQS-------GELIGICTFTAYSLEGSQPSEIGVVRLVMLGVARKYQKRGFDQDLLCDFFEHVKIIHQIKGVYLDADPAAINFYARLGFVQLSATPNAFGAVPMFLAIQHILAALEHHHHHH---- | |||||||||||||
4 | 1jqmB | 0.07 | 0.06 | 0.93 | 0.62 | EigenThreader | EKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTRLTFIRVYSGTLTSGSEELKAGDLGAVVGLKETITGDKLSQALARLATHPETGQTIISGMGELHLEIIVDRLKREFKVD---------------ANVGKPQVAYRETITVEGKFIRQTGGRGQYGHVKIVEPLPRMQSGPLIGFPVVDIKVTLYDGEMAFKIAGSMAIKEAVQKGDPVILEP----IMTPEEYMVIGDLNARRGQILGMEPRGNAIRAFVPLAEMLRSKTQGRGSFVMF | |||||||||||||
5 | 1yb3A | 0.19 | 0.08 | 0.44 | 0.38 | HHpred | ---------------------------------------------------------------------------------------------------KEVHELLNRIWGDIFELRE---ELKEELKVEEYIDGKWEE--KYPHPAFAVKPGGEV-GATPQGFYFVFAFPKEELSDVIRAFEKLFIY--------GAENFFEHSGDEVW-DRIVNSDEE-INFEVDLGDKEEVKRE--------------------------------------- | |||||||||||||
6 | 2pr1A | 0.14 | 0.07 | 0.51 | 0.73 | MRFsearch | ------------------------------------------------------------KVERLLIN-------------------------------YKTLEEFKKFKEYGIQELSMLEELQDNIIENDS---------TSPFYGIYFG---------DKLVARMSLYQVNGNPYFDNR--QDYLELWKLEVLPGYRGYGRALVEFAKSFK------MPIRTNPRMKSAEFWNKMNFKTVKYDRDKGEDPLIWHP------------------- | |||||||||||||
7 | 2cy2A | 0.15 | 0.09 | 0.61 | 0.45 | FFAS-3D | -------------------------------------------------------------VRIRRAGLEDLPGVARVLVDTWRAT----------YRGVVPEAFLEGL-----SYEGQAERWAQRLK---------TPTWPGRLFVAE--------SESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRA---LFHEGARLLQAEGYGRLVWVLKENPKGGFYEHLGGVLL------GEREIELGGAKLWEVFDLGGHKW----- | |||||||||||||
8 | 5oi9A | 0.11 | 0.10 | 0.93 | 0.54 | SPARKS-K | QGEQEELHLLKGSDCNLTIDITEKCLRLAQRSAYQLHTETKFFLLGSLNINK----DDRVIINIDRFDPGRIISL-HVPTA--VIPGDVIIPLSQLACLSPFSSEYYDAFQTLTKNLKLSCDSVDIKDLSLKIHATYYVDSDINVTSGVVVPSALILPVDTQKSGYVAILVLDSDPKLSS-IPLVGIWVDGVISI-----HHPYVWSACRYLYSQRLTNILVLYTQTRPKPE-----FWECSFSGKSDKFLYCQASKTRNEQLVPNEFGENLYFQ- | |||||||||||||
9 | 4e2aA | 0.12 | 0.06 | 0.52 | 0.90 | CNFpred | ------------------------------------------------------------QVEIRKVNQ----DELSLLQKIAIQT------FRETFAFDNTAEQLQNFFDEAYTLSVLKLELDD-----------------KESETYFILM-------SGKAAGFLKVNWGSSQTEQV---LEDAFEIQRLYILKA-LGLGKQLFEFALERAQIS-GLSWVWLGVW-KAQLLYAKYGFEQFS--------------------------------- | |||||||||||||
10 | 6um1A | 0.07 | 0.05 | 0.76 | 0.67 | DEthreader | ---------L-PLIKTSNVCRGLYTITFVIPKLTAEIE-------SALARHSELEQNWEFFINICHRD-----RFIS-SPT--REKGNIQLSYSDGDECGGQKIITNITLTTSEFEWRTAAACVDSQAGFSFDLCAKLIFWYTSCEEPLECIVTDLDQ-DLSRLAKS--------------------NWY------------INVCR-PLNPV-PGCDRASACALIHLVCSTG-SLYTHPIFSL---VVSFLWNVDCQVT--VCTPLPTAVVQISV | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |