Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LMYKKIVGHKKNMLPATLNNIDDSQNVALNRKKSENKKLTLQEKIELSWQFLYDLTEIILNKFSKEDVVQVNKCGQILFENGVRYEH |
1 | 2k6xA | 0.09 | 0.03 | 0.38 | 0.62 | DisCoVER | | ----------------------------------------------QIERRIKKLISLGKK-KGYITYEDIDKAFPPD------FE- |
2 | 4zi6A | 0.06 | 0.05 | 0.77 | 1.00 | DEthreader | | -ECILYALSCAGLKGLESVLK----------------KAKEALKYAEIMTESLNIVKDLVNTGTPVYMAEVAQKVAKENH---NAAV |
3 | 6e6tA2 | 0.04 | 0.03 | 0.98 | 0.52 | CEthreader | | PTTSTLYYQFRKVVESLAGVLGEQAAREALAEGTAAAIGDVEGLGAELVRVFTAAGRAACAAADLDDEFADELTATYRSF--VSYLV |
4 | 2q13A1 | 0.06 | 0.06 | 1.00 | 0.53 | EigenThreader | | HRIYDAQNELSAATHLTSKLLKEQQFSKVIDELSSCHAVLSTQLADAMMFPITEVFQIASNDHDVYTSRKKQHQKKKIALLEPLLGY |
5 | 3g3zA | 0.09 | 0.07 | 0.77 | 0.26 | HHpred | | ---------GQGLIEWQEGEQD---------RRKRLLSLTEKAYAAPLTESAQEFSDKVFATFGDKRTTRLFADLDALAEVEKTI-- |
6 | 1ivsA3 | 0.15 | 0.11 | 0.78 | 0.42 | MRFsearch | | -------------------ATQVVVERLLLKEGKTRHDLGREKFLERVWQWKEESGGTILKQLKEKRSRAVRYAFSRYYHEGLAYRA |
7 | 3vokA2 | 0.04 | 0.03 | 0.79 | 0.46 | FFAS-3D | | ---------------IDSPQYKLYKYRFLDWTYELERDWKDNPISQVLKSVVHNVYRLFSENWTEKTFIENYDKEIKLVTEGLL--- |
8 | 6w2rA1 | 0.04 | 0.03 | 0.95 | 0.68 | SPARKS-K | | EDERRELEKVARKAIEAAREGNTDEVREQLQRRESG----TKTAVKLALDVALRVAQEAAKRGNKDAIDEAAEVVVRIAEESNNSDA |
9 | 3tm8A | 0.08 | 0.07 | 0.87 | 0.41 | CNFpred | | -----------KMYILTENSYRTYLQKNIETAYDDTTGKDIQTRADIIQGSQQNNAEEVFENPNVESYNYCKDAAGKYVNFIMSNAQ |
10 | 3du6A | 0.02 | 0.02 | 0.95 | 1.00 | DEthreader | | EVKPRGISAKFLLTKYKEEKYKT-SGSLYTCW-STFNFNDQRTVFANFYDAMICVAYKFDAAMMRNF--IWYGLIDRIKSREKLTFC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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