Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MDDFTTRTYGTSGMDNRPLFGETSARDRIINLVVGGLASLLVLVTIISSFVFPSLPPKPLNIFFAICIMLVCGSVLVLIYWYRQGDLEPKFRNLIYYMLCSIVLLCICANLYFHDVGR |
1 | 1w27A | 0.07 | 0.07 | 0.97 | 1.17 | DEthreader | | EAARAGVQGYSGIRILALVNGTAV-GSG-MASMVLFEANILAVLAEVMSAIAEGDRLRT-SPQWLGPQIEVIRSSTKMIEREINSVNQGTPIGVSMDNTRLAIAAIGKLMFAQFSELN |
2 | 2jbsC | 0.07 | 0.06 | 0.91 | 1.17 | DEthreader | | GIEYRISSA-G-FGLP-----YT---PY-RPYFASGFSAVSLGIAERMIEAFKEQALMAESTHQVAAARALLEKTWEDHRIHGLQYPNKETLAFWRTNQAYAVKMCIEAVDRLMAAAG |
3 | 6at7B | 0.07 | 0.07 | 0.97 | 1.17 | DEthreader | | EEARPRVQGYSGIEGLAIVNGTSV--GSALAATVMYDANVLAVLSEVLSAIFCGDRLRT-SPQWLGPQIEVLRAATKSIEREVNSVNQGTPIGVSMDNARLAIANIGKLMFAQFSELN |
4 | 2rfqA | 0.07 | 0.07 | 0.91 | 1.17 | DEthreader | | VGVTVLATAPGLE-NT-P----K---PW-GTIHPTTISAPIVG-AYGAYDAHVHQAAKVRIAEASSDIDAAWRQLSGNVADEYALEVPFELRLRARRDQVRATGRAISSIDKLFESGA |
5 | 5ee7A | 0.12 | 0.09 | 0.75 | 0.52 | DisCoVER | | -----------------------------FQVMYTVGYSLSLAALLLALAILGLHCANAIHANLFLSFVLKASAVLFIDGLSTSDGAVAACRVAAVFMALSSFQGLLVAVLYCFKEV- |
6 | 2nyfA | 0.10 | 0.09 | 0.97 | 1.17 | DEthreader | | LTDNADVYGASGIRLIAMNGTSVM--TGIAANCVYD-AKVLLALTMGHALAIYGDRLRC-LAQFIGPIVDGVSEITKQIEVEMNSVNLGQYVGVTMDRLRYYIGLLAKHIDVQIALLS |
7 | 6t15a | 0.12 | 0.12 | 1.00 | 0.34 | CEthreader | | TLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVV |
8 | 7a23I | 0.11 | 0.11 | 1.00 | 0.75 | EigenThreader | | LGAFSSGILLFGCSMIYGSTGATHFDQLAKILRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVLALRQTKTNPILAITFSITMFSYAGSKFYLFFAALGCGA |
9 | 3ux4A | 0.14 | 0.11 | 0.76 | 0.24 | HHpred | | -----------------CGLTVDPKSTAVMNFFVGGLSIVCNVVVITYSALHP----TAPSFYGPATGLLFGF-TYLYAAINHTFGLDWRYSWYSLFVAINTVPAAILSHYS------ |
10 | 7a23J | 0.14 | 0.10 | 0.75 | 0.18 | MRFsearch | | --------------------------EFAPIFIYLVISLLVSLILLGVPFLFASNRFDIRFYLVSILFLIFDLEVTFFFPWAVSL---NKIDLFGFWSMMAFLFILTIGFLYEWKRG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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