>PF10846 (474 residues) MSSDSMSVHSLIDKFSNSERVSNEQRGVGTRKRGSEVHQKSQQQQTQQDEVNQEHVKEAN TNSIDETGLLSLLGPNVKSFPLSEEAYIESIKLRTEQEKTKQSYYKLETANKNLLMLNTA LKANIPPNLIPLMYVPNEDVNAKPNIDPGFKSGVKSESSSAVSSPFQQGNRAGVRNLYQQ DTSSSSLVPPINYKFGGSNTPNATRRPLSPAKIGAAAVANLATPTNPYKNNRRNILPSHQ RHFSMPAPTSSVTPNRNRATPGDLNAIDTTLQPQNKLKPPSNISTLNASGNTSDSGTLQS PLGATSSIQVKPSPAQPLHKSTRSANPPSQESMTSFQHIIQFHHWKPDGPSVGSSTGGSP MRMHKRHKSSSENMSIDLTPNSFSNINENAPVIRVNNSHDIDINSNDDQDVDDDEDDDDN DNDVDDDDDITMETSTITDINVSKIPRTESFDDSNNDTSSNIGRYPHDILSPSN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MSSDSMSVHSLIDKFSNSERVSNEQRGVGTRKRGSEVHQKSQQQQTQQDEVNQEHVKEANTNSIDETGLLSLLGPNVKSFPLSEEAYIESIKLRTEQEKTKQSYYKLETANKNLLMLNTALKANIPPNLIPLMYVPNEDVNAKPNIDPGFKSGVKSESSSAVSSPFQQGNRAGVRNLYQQDTSSSSLVPPINYKFGGSNTPNATRRPLSPAKIGAAAVANLATPTNPYKNNRRNILPSHQRHFSMPAPTSSVTPNRNRATPGDLNAIDTTLQPQNKLKPPSNISTLNASGNTSDSGTLQSPLGATSSIQVKPSPAQPLHKSTRSANPPSQESMTSFQHIIQFHHWKPDGPSVGSSTGGSPMRMHKRHKSSSENMSIDLTPNSFSNINENAPVIRVNNSHDIDINSNDDQDVDDDEDDDDNDNDVDDDDDITMETSTITDINVSKIPRTESFDDSNNDTSSNIGRYPHDILSPSN | |||||||||||||||||||
1 | 5jcss | 0.08 | 0.08 | 0.94 | 1.33 | SPARKS-K | LPKSFSVVFI--DMLTSDDLLLIAKHLYPSIEPDIIAKMIKLMSTLEDQVCKRKLWGNSGSPNLRDTLRWLKLLNQYSI-CEDVDVFDFVDIIVKQRFRTISDKNKAQLLVAVYESVLKAINNNWPLTETIRFLASILGNSDIDSMLGGYEQVDLTRQISYITEELTNIVREIISMNMKLSPNATAIMEGLNLLKYLLNNIVTPEKFQ------DFRNRFNRFFSHLEGHPLLKTMSMNIEKM---------TEIITKEASVKFEWFDGMLVKAVEKGHWLILDNANLCSPSIDGSLLINECSQEQPRVLKPHPNDPKYG-------ELSRAMRNRGVEIYIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIILLLSDEEPIEESLAAVIPISHLGEVGKWANNVLNCTEYSEKKIAERLY-VFITFLTDMGVLEKINNLYK--- | |||||||||||||
2 | 2nbiA | 0.13 | 0.13 | 0.96 | 1.04 | MUSTER | DVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDPFPPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPA--PSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPA-VNRPDCDVLPTPQNAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPVLPFPNGCPSCCPFECSPDNPMFTPSPDGSPPNCSP--------------TMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMSPSPDGSPPVCSPTMMPSPLPSPTE | |||||||||||||
3 | 2pffB | 0.04 | 0.04 | 0.97 | 0.75 | DisCoVER | GGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGQVWVLSATQFTQPALTLMEKFAGHS-LGEYAALASLADVMSISNYGMIAIVGKRTGWLVNYNVENQQYVAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------- | |||||||||||||
4 | 6pnsA | 0.06 | 0.04 | 0.69 | 0.67 | DEthreader | ESAKVPLGMQVMAD-FVNRFD-SPF--H----------------QGNR-LSNLED-FQVAYT--TPLLFEMC-----CMESILEFNIKMRMREEEI-ALEFGDMK-VDPVGLLREFFILCLPPKINNVLRAPYSWF----------------------SSFYNESR--R---MNEEKILRLFEKMLKTVYT---F----------NMILASFLLSIQTITGYGRDVPIK-FSRVKVIVGRV---FSTIAIDY-------------------GYGRVTLALIDTHLSG----ANSHNGDDTASPSKT-----------TH-A----KQGCYVP-----QDRMMIISSERRKDI--EDVQGYVRQVTMITK------QLMALYVPIGWGGAHPAAIVMTEEYVDSMI-KLMRMRLGEISTS-----PDQNLSPQFYI-QKMMI---FITYLASLYCTQIMLRAA------------ | |||||||||||||
5 | 1vt4I | 0.05 | 0.05 | 1.00 | 0.57 | CEthreader | DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
6 | 4kvmA | 0.05 | 0.05 | 0.90 | 0.73 | EigenThreader | KEITLFRTALKCYETKQYKKGLKAIEPLLERHPEHGESLAIKGILLHSLEGYDNVRLGLRND--VGSGVCWHIFGLISRADKDYVQAAKCYINAHKLESLLRDLALLQSQLLADTRNALLQDNPGVRANWSALAVAQFLRGEYASAYKIVDAFESTINQGVPVDTQEESEAMLFMNLVILKKDNPDNHQYYYNLQRAYGYEDASGKVLDSAEWLNLYSQL--AKRYPKSECPTRLPLEKLEGDEFLTHVDLYLRKKLKRGIPS----------------VFVDVKSLYKDTKKCKVVEDLVSKYAS------SLSTTNKFSEDDDNSQIEIPT-------TLLWTYYFLAQHFDELEKAEKYVDLAIDHTPTLVELFMTKARISKHKGELQTAMEIMDHARKLDLQDRFINGKCAKYMLRNDENELAAKTVS-------------LFTRNEAVGGAVGDLADMQCLWYMLEDGK | |||||||||||||
7 | 6gmhQ | 0.16 | 0.08 | 0.49 | 0.37 | HHpred | ------------------------------------------------------------KRDIAKGHLKKV----TEQYPDDVEAWIELAQIL-EQTDIQGALSAYG---TATRILQEKVQADVPPEILNNVGRGNLGEAKK--YFLASLDRAKA---EAEHDEYYNAISTLARLYEACEFHEAEKLKNILREHPNY--------VDCYLRLGAMARDK--GNF---YEASDWALQINQKKFERILKQPS--------TQSDTYSM-------LAL---GNV-------------WLQT---------LH----QPTRDREKE-KRHQDRALAIYKQVLRNDAKNLYA-ANGIGA----VLAHKGYFR--------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 1dipA | 0.19 | 0.03 | 0.16 | 0.40 | MRFsearch | ----------------------------------------------------------------------------------DLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLASPEQLEKFQSRLSPEEPAPETPEAPEAPGGSA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 3cnfB | 0.06 | 0.06 | 0.95 | 0.57 | FFAS-3D | ----QNVLLLFFSRWYPVEIFVQRGATYTINAAGEFEFSGRNEKWDQALYLSEHFPALFSDVPLAGIAIMRLFTPIAANFPYTNQRGTNEFASRFRTANVVNERAVQDDMQKATRLRHLETQFDNIAVAHTDHLSVVYATMSNFMLNFTNNFATHVAVVLYQSGVINGPASTYLRENEVLVVMPDYYDVVSRFANANQMNNNRYHESVLEIADIIQTSDAVRQLRALMPTLSTSQIRHAIERIAQITDVDSTDRSLKMQNAQIRRIRPDGTVRYDDQIDIEAFRWSRYFLDELQLRRLSVGLRLITNPRIRRFNGVRIMYLTDDDPDPDF---------------VPDVPEGYVAVQYAHRLFSSSLANKRNRVTYTHPPTGMAYPPTGRPHVHMTINERAGMSKLVADNIIASVIKSNWVVDILDIEYTAE--VMTPSEGYTQHVDAESIMTAPKGKLFHL-QFMDGLLRPEA | |||||||||||||
10 | 6rlbC | 0.07 | 0.05 | 0.81 | 1.06 | SPARKS-K | -----------KNTKQAYVQCNEDNVERDIQTEEIETREVWTQHPGESTVVDAVVMPKIDTP-----------------------------RLCSFLRAACQVMAVLLEEDR-------------------------LAASDSSSQLNTSLPFLQNRKVSSLHTSRVQRQMVVSVHDLPEKSFVPLLDSKYVLCVWDIWQPSGPQK--------------VLICESQVTCCCLSPLKAFLLFAGTAHGSVLREDSRLHYSVTLFWTFRTATFSTDGILTSVNHRSPL-------QAVEPISTSVHKKQSFVLSPFS---TQEEMSGLSFHIASLDESGVLNVWVVVELPKADIAGSISDLGLMPGGRVKLVHSALIQLQTLNVKFLPSDPNHFIIGTDMGLTRQDLRVAPKLFKPQQHGIRPVKVNVIDFSPFGEPISAFPLLQWDSST---DSHAVTGLQWSPTRPAVFLVQD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |