>PF10833 (219 residues) RGIMTLTLLMLLSVMLLIFMLFDDDAIRLHSSLASLRQIYVSHNIELQQISQQQKRTACS EVPLNSTATVTRVAFEQAGFSDSNRHYIWCRRSALFKQSPKKGINEGRFSEMINEESVSL FQGKFGLPNDLVQEQSDYLYWLDKNQTEWTIAGDIYGIIVAEGNLHIAGKGRIRGAVISG GAISTDEKVSIAYRKATVTNLVQLYSQWQRAEKTWHDFT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RGIMTLTLLMLLSVMLLIFMLFDDDAIRLHSSLASLRQIYVSHNIELQQISQQQKRTACSEVPLNSTATVTRVAFEQAGFSDSNRHYIWCRRSALFKQSPKKGINEGRFSEMINEESVSLFQGKFGLPNDLVQEQSDYLYWLDKNQTEWTIAGDIYGIIVAEGNLHIAGKGRIRGAVISGGAISTDEKVSIAYRKATVTNLVQLYSQWQRAEKTWHDFT | |||||||||||||||||||
1 | 6n2cA3 | 0.10 | 0.04 | 0.42 | 0.72 | DisCoVER | --------R--LD----------------------------------------------------------------------------NIVE-DKK-DI------------------------------NGANYYSLVSTGDINIFNKPPNVQIFVITKSGINVPDQNHLDGVLIANGSLQFNGGNLNIEYVRMPQP--LIDYLLSKNIIK------- | |||||||||||||
2 | 4i3gA | 0.07 | 0.05 | 0.68 | 0.67 | DEthreader | TATA--LPAPVA-LASTFD-------IRSEDPLSSRTAVAQIKGIA--RD-KAGAQA---------IAVAVDPVTGLGS---AHVVPSAADTIKARAG-----------------------------TYEASARTAVVFAYDDGRNLSLDISANTIVVLNTGSSVLMPWLKTRAVLDWLTQSFPAAEPLFPHGLSYTSRAGQ----------------- | |||||||||||||
3 | 4wa0A | 0.05 | 0.04 | 0.89 | 0.84 | CEthreader | -----------------------TSVPSSPLDYAIFSKGALNTNKNLTVENGSVYSGGDLTIDGGAVFNIDNLISKGEVINQDSDSRCRDNNIVVRNIIYVEKSLKANRISPRSTNIDAKTIYVGQEQLYGAGSYKFVQLFSDSNVKLAGPGVNVSTLASIRGTLEVIDGATVTLSAVYCNSLVVRNGSRLILENGAKLYLATTPDASTIISIQNNGGT | |||||||||||||
4 | 2iuaC | 0.09 | 0.06 | 0.66 | 0.68 | EigenThreader | ------------------------------------------------QEQLADFLKVGVEEIEEAKTAHITFLIISRTLNKNFLITSESKCLELFICQHAAYSTVG---------------EIRERPGAAFGQKHLGKVIIEDDV-EIGANTTIDRGSVVREGSKIDNLVQIAHQVEVGQHSIVAQAGIAGSTN-----------HVIIGGQAAQTGV | |||||||||||||
5 | 3wp9A | 0.08 | 0.05 | 0.59 | 0.39 | HHpred | ----------------------------------------ELAVSDMGIAYNDAAGRVPADLGTG-EIGGL--T---------LEPGVYKWSSDVN--IS------TDVT--FTMDDV--WIMQISGNVTLTGALAKNIFWQVAGYTALGTYASFEGIVLSKTLISVNTGTTVNGRLLAQTAVTLQKN-TINAPT------------------------ | |||||||||||||
6 | 6csxB | 0.08 | 0.06 | 0.79 | 0.45 | MRFsearch | --FSITIVSAMALSVLVALILTPEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPPDEDQGVFMTMVQLPAG-----------------------ATQERTQKVLNEVTHYYLTKEK--------NNVESVFAVNGFGFAGRG-QNTGIAFVSLKDWAD---KDAMVFAFNLPAIVEGFDFELIDGHEKLTQARNQLLAEAA--------- | |||||||||||||
7 | 4psnA | 0.12 | 0.10 | 0.86 | 0.59 | FFAS-3D | -GLVIAAGYADKVRRVLFAQL---------RDAIKSGELSNKDVAAAGNLNRVLFELLVNKLKADKLD-VVRIQIDYEVRDSQIQFDFSTLRVELWRRVPEEEIAPIVEDFARAAPRLLEEEIRFTVEKVGETDVGDVVYRIYRGSD--------VGALIVT---PLNGEALVRGAVVEPTPLLLK-RTRVQVEADRIDDFVREFSEAQNVE------- | |||||||||||||
8 | 4psnA | 0.14 | 0.12 | 0.89 | 0.67 | SPARKS-K | -----------LPTLRTGLVIAAGYADKVRRVLFAQLRDAIKDVAAAGNLNRVLFELLVNKLKADKL-DVVRIQIDYEVRDSQIQFDFSTLRVELWRRVPEEEIAPIVEDFARAAPRLLEEEIRFTVEKVGETDVGDVVYRIYRGS-------DVGALIVTPLN----GEALVRGAVVEPTPLLKRTRVQVEIDDFVRESVSRLFSEAQNVEKREAVRV | |||||||||||||
9 | 6cj7A | 0.06 | 0.05 | 0.92 | 0.56 | CNFpred | SGNLAASPFSITILLAMLQQGAAGNTLDEITRALQMTPEKSAEIFKKVNEEIQKRNSRNIL------KTANNVFLSENFNL-VNNFDSDLTPTYFG----KPALAAQNINSWIASKTNDKIDKLVSPDDLSG---NTQMVMVNA-TQKRNFTKKVASFMQTRRYFKAGTMAKVVVLPFEYNEYSLI--VVLPLKSSNVDALLSSLSDVASFLDLPPKDV | |||||||||||||
10 | 3b5xA | 0.09 | 0.06 | 0.74 | 0.83 | DEthreader | -------FGNAESNFLRILPFMILGLMFRGLSGFASSYCLSVSGNVVMQMRRRLFNHFMHMPVRF-FDQESLRDSVA-TSAFGMACTLLM-----TYQPALVFLVGRSGSGKST--N-SQNVHLQVAIARALLRDALILDETSALDTERAQAA-L-----------DELQKNKTVLVIAHRLSTIEQ-ADEIL-------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |