Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LTVTGALIGALWAWLAPPIHGVVALTKKGERVKAFLGNESDHFFVSAFLIAGMLGVLAVVAAMLLWQWRAHRGPVMVAALAIGAAAGAGSAAAVGALLVHWRYGAIDIAGAPVSPEHRVHYVIEAPAVFFGHSPLQVAATILLPAATAALVYALMAVSTQRDDLGA |
1 | 5xu1M2 | 0.06 | 0.05 | 0.86 | 1.00 | DEthreader | | ISLLTMIGIIIGVSSVVIMGDSRQNKT------QQFSFMTIISSIAGISLFVGGTGVMNIMLVSVTERTRGKRANILIQFLIESMILTLLGGLIGLTIASGLTLAGL-Q-I-G------I-E-V-G-VSIPVALFSLAVSASVGMIFGVLPAN-KA---KLDPIE- |
2 | 5xu1M2 | 0.08 | 0.08 | 0.95 | 1.07 | EigenThreader | | RSLLTMIGIIIGVSSVVVIMALGDSLSRQVNFSFMTTIISSIAGISLFVGGTGVMNIMLVSVTERIGLRKALGANILIQFLIESMILTLLGGLIGLTIASGLTALAGLLLQGLIEGIEVGVS----IPVALFSLAVSASVGMIFGVLPANKASKL----DPIEAL- |
3 | 5gkoA | 0.13 | 0.11 | 0.89 | 1.00 | DEthreader | | SNRRTFLTL-GIIIGASTVLGSQINISLGSRIETTSTLVSAAVISLVVGG-IGV-NI-LVSVTERTQEIGVRAQDILQQFLIEAILVCLIGGVLGVLLSLGLGQLIN---AGG-----N-FA-VAYSTTSIVAAVCSTLIGVVFGFLPAKNAAK-LD-PVAALS-- |
4 | 5xu1M | 0.06 | 0.05 | 0.86 | 1.00 | DEthreader | | ISLLTMIGIIIGVSSVVIMGDSRQNKT------QQFSFMTIISSIAGISLFVGGTGVMNIMLVSVTERTRGKRANILIQFLIESMILTLLGGLIGLTIASGLTLAGL-Q-I-G------I-E-V-G-VSIPVALFSLAVSASVGMIFGVLPAN-KA---KLDPIE- |
5 | 5lilA3 | 0.09 | 0.08 | 0.93 | 1.05 | EigenThreader | | SVSAIVAHMLGIIIGITSVVSVVALGNGGTMKLLISSIAFISLIVGGIGVMNIMLVSVTERTKEIGVRMAIGAR--QINILQQFLIEAVLICLIGGVAGILLSVLIGVLFNSFITDFSMDFS---TASIVTAVLFSTLIGVLFGYMPAKKAAE------LNPITAL |
6 | 5lilA | 0.07 | 0.07 | 0.91 | 1.00 | DEthreader | | AIVHRSLLTMLGIIIGTSVVVGNQQLERDIETTMLISIAFISLIVGGIGVMNIMLVSVTERTKEIGVRMAIGA-R-QINILQQFLIEAVLICLIGGVAGILLSVLGV--NS-IT---DFSMDFSTASIVTA-VLFSTLIGVLFGYMPAKKAAELNPITA-L----- |
7 | 5lilA3 | 0.06 | 0.05 | 0.90 | 0.71 | DisCoVER | | SVSAISLTMLGIIIGITVVVALGNGSK-GTMKLLISSIAFISLIVGGIGVMNIMLVSVTERTKEIG--VRMAIGARQINILQQFLIEAVICLIGGVAGIL-LSV-LIGVLFNSFITDFSMDFSSIAV------LFSTLIGVLFGYMPAKKAAE-LN----PITAL- |
8 | 5nikJ3 | 0.11 | 0.09 | 0.81 | 1.00 | DEthreader | | LTLLTMLGIIIGIASVSIVVDA-------------TRTLQFLTLVAVISLVVGGIGVMNIMLVSVTERTRGMASDVLQQFLIEAVLVCLVGGALGITLSLLIATLQL---GW---------EIGFS--P-LALLLAFLCSTVTGILFGWLPAR-NAA--RLDPVDA |
9 | 5xu1M2 | 0.07 | 0.07 | 0.95 | 0.72 | CEthreader | | TMIGIIIGVSSVVVIMALGDSLSRQVNKDAEIQQSFSFMTTIISSIAGISLFVGGTGVMNIMLVSVTERTRTRANILIQFLIESMILTLLGGLIGLTIASGLTALAGLLLQGLIEGIEVGVSIPVALFS-------LAVSASVGMIFGVLPANKASKLDPIEAL-- |
10 | 5nikJ3 | 0.12 | 0.11 | 0.92 | 1.03 | EigenThreader | | RTLLTMLGIIIGIASVVSIVVVGDAAKQMVLTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVVLQQFLIEAVLVCLVGGALGITLSLLIAF---TLQLFLPGWEIGF-----SPLALLLAFLCSTVTGILFGWLPARNAARL-----DPVDAL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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