Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KLVTYFLILVSSLKVNADLNHIQDSFKYQEAEQLTIELPWNDCTAIHKFLEEKLFFSEQQIKKENKIHEKYKQFYLQHNNKLSDFSMQFLEKKSEINSVETLISGFLKFCEDNFQTSKSKSHSLNFFQKQQDQWLHNIRNENYKTYYKKKYEDNTFRN |
1 | 1f6gA | 0.18 | 0.08 | 0.42 | 0.70 | DisCoVER | | LLVLLGSYLAVLAERGAPG--AQ-LITYPAALWWSVET-A--TTVG--------------------------------YGDL--YP--V--------TL-WGRCVAVVVMV-AGIT---------SF------------------------------- |
2 | 6gmhM | 0.05 | 0.04 | 0.82 | 0.83 | DEthreader | | -------------------------PERFQRSIKGAEDELEEEADWIYRNAFATPTI--SLSRKGSTIQKIKEALGFMRN-QHFEVPFIAFRKPELHINDLWRVWQWDEKWTQLRIRELTRKDVQSMDEE-NKLAEAKEYVIKACSLYNWLRVAPLEQ |
3 | 3i8bA2 | 0.05 | 0.04 | 0.97 | 0.48 | CEthreader | | TSGVAAAISENPTYDLTGAVSGFAD----CTGHYLPLACTINGSRILDAGRAALGVDYDELAKLAFASKANGITLVPYFDGEPNATATFSGRENLARAFVEGLLCSQRDCLELIRSLGASITRILLGGAKSEAIRTLAPSILGDVTRPATTIDGVETG |
4 | 1f6gA | 0.06 | 0.06 | 0.89 | 0.70 | EigenThreader | | -------MPPMLSGLLARLVKLLLGRHGSALHWAAAGAATVLLVIVLLAGSYLAVLAERQLITYPAALWWSVETAT-TVGYGDLYP---------VTLWGRCVAVVVMVAGITSFGLVTAALATWFVGREQERRKAAEEAYTRTTRALHERFDRLERM |
5 | 3tijA | 0.23 | 0.15 | 0.66 | 0.39 | HHpred | | --LIAFIGLIAL--INGMLGKLEMLLGWLFPLAFLIGVPWNEATVAGEFIGLKTVANEFQFAPYLTLSEKTKSFALCG---FANLSILLPKRRGDIARVKAVIAGTLSNLMA---------------------------------------------- |
6 | 3tq6A | 0.12 | 0.09 | 0.79 | 0.40 | MRFsearch | | --VSSYLRFS-----------------KEQLPIFKAQNPDAKTTELIRRIAQRWIYQDAYRAEWQVYKEEISRFKEQL----TPSQIMSLEKEIMDKHLKRKAMAYNVYVAERFQE-----SPQEKLKTVKENWKNLQHAKEDETRYHNEMKS----- |
7 | 3epvA | 0.08 | 0.05 | 0.63 | 0.62 | FFAS-3D | | ---------------------------------------------LHEILHEAVPLDANEREILELKEDAFAQRRREIETRLRAANGKLADNPAWSPEVEAATQEVERAAGDLQRATLVHVFERAGLKPEHRPAYDRVLIDALR-------------- |
8 | 1ls4A | 0.16 | 0.15 | 0.89 | 0.58 | SPARKS-K | | -------------RPDAA-GHVNIAEAVQQLNHTIVNLPLNLLTEQANAFKTKIAEVTTSLKQEGSVAEQLNAFARNLNNSIHDAATS-LNLQDQLNSLQSALTNVGHQWQDIATTQASAQEAWAPVQSALQEAAEKTKEANLQNSIQSAVQKPAN-- |
9 | 4yknA | 0.12 | 0.09 | 0.73 | 0.49 | CNFpred | | -----------------------------------------KSREYDRLYEEY-TRTSQEIQMKRTAIEAFNETIKIFEEQCERYSKEYIEKFKGNEKEIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLRKTRDQ |
10 | 4k1pA | 0.09 | 0.07 | 0.82 | 1.00 | DEthreader | | LVILQQPDIKVN-AMS---------------TN-QKFANLDDSNNLSIKADEAIKTQGDIVKLREDIKRIQGI--L--NIG-KQVFIDFIQLSQ-TEAEATQITFVEDQVSSFTELIDRQITTLETLLTDWKVLNNNMIQIQKNVEEGTYTD------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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