Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | FAVPGPVKALFDHFPLQTYPPISKRDDAMNYEFAQRTYDFQGPNAVQDDINNTFTLGVYNTFQESSSDVALATDPWCLYAQLALCKKNSLKLPQVTRAESGRPSKPQQKMALLSPLATQNESLPILVE |
1 | 6wuhA | 0.27 | 0.20 | 0.73 | 1.81 | HHpred | | MQIPRPLQRLFDYFPLRIYEPNELPERS--------------Q---QLTSGDLPTLYVFSTDSDA-RLGLPSFNPGCLKWQTLLRLA-NLDF----------------RILPSTNHSSPTGSLPFLLP |
2 | 6wuhA | 0.27 | 0.20 | 0.71 | 1.42 | MRFsearch | | --IPRPLQRLFDYFPLRIYEPNELP-----------------ERSQQLTSGDLPTLYVFSTD-SDARLGLPSFNPGCLKWQTLLRLAN-----------------LDFRILPSTNHSSPTGSLPFLLP |
3 | 6wuhA | 0.26 | 0.19 | 0.73 | 1.15 | FFAS-3D | | MQIPRPLQRLFDYFPLRIYEPNELPERS-----------------QQLTSGDLPTLYVFSTDS-DARLGLPSFNPGCLKWQTLLRL-----------------ANLDFRILPSTNHSSPTGSLPFLLP |
4 | 6wuhA | 0.27 | 0.20 | 0.73 | 1.04 | CNFpred | | MQIPRPLQRLFDYFPLRIYEPNELPERS-----------------QQLTSGDLPTLYVFSTDSDAR-LGLPSFNPGCLKWQTLLRLAN-----------------LDFRILPSTNHSSPTGSLPFLLP |
5 | 6wuhA | 0.07 | 0.05 | 0.77 | 0.83 | DisCoVER | | ------FDYFPLRIYEPNELPERSQQLTSG-DL--PTLYVFS--TDSDARLGLPSFNPGCLK------WQTLLRLANLD--F--------RILPS-TNHSSPTGSLPFLLPPLLLPGSFDAALFSYL- |
6 | 2qm8A | 0.12 | 0.09 | 0.75 | 0.83 | DEthreader | | -DLRERLLALARAITLESRARD--------------RVGITGVVKSTDAGSLVAVLAVDSTRTGSGDKRPSPGVAAKTRET-LLCEAAGFVILDFFLADPPVLWIE------WALERQ---------- |
7 | 2yv9A | 0.09 | 0.05 | 0.61 | 0.69 | CEthreader | | ----------------------------------AMAEAYQIQSNGDPQSKPLLELYVKASGID---ARRIGADLFCQEFWMELYALY-------------EIGVARVEVKTVNVNKNFLGAQPPIMI |
8 | 6jjaA | 0.06 | 0.05 | 0.78 | 0.53 | EigenThreader | | MGSNLIPYTPVTVIGDIDLSSEESG----------ITLTVGSYRNRIPSKPNFIIVAAYAAPGDKTGIAHRAA-------AGILYPPAAQMFYGIS--------ATGTLNTITTTAKD---PVPVVRA |
9 | 6wuhC | 0.24 | 0.10 | 0.42 | 0.45 | MRFsearch | | ------------------------------------------------------QLHVWGP-----AFGLPSIDAECLAAIAYLAQTL---------------GSADYQLIQSSPSAVPTQHLPTLYD |
10 | 2d2zB | 0.14 | 0.08 | 0.56 | 0.43 | FFAS-3D | | ------------------------------------------NGLKEEDKEPLIELFVKAGSDGES----IGNCPFSQRLFMILWLK-GVVFSVTTVDLKRKPADL--------QNLAPGTHPPFIT- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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