Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MKNVIFSMLAKISKMDAESKQLTAQVEAQSLLIGALTLTVGKNGGMTRMVESVNKAINSVLDSQDDVLRSDADILLNEFRNLLEVTR |
1 | 3gi9C | 0.04 | 0.03 | 0.90 | 1.17 | DEthreader | | ------GDNIITGALSILLWMSYVISIALFAKGFAGYFLPLAPINTFNIAITEIGIVAFFTANFWTGLYITSALGVLFALLFN-G-- |
2 | 3k07A | 0.10 | 0.09 | 0.97 | 1.17 | DEthreader | | E-EFLPSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNSEQKLDEALYHGAVLRV-RAMTVA-IPLLSLFIIPAAYKLMWL |
3 | 2witA | 0.12 | 0.11 | 0.95 | 1.17 | DEthreader | | GKGAEGLGKLIDILAIIATVFGTACSLGLGALQIGAGLSAAII-E--SDWTIVGIVSVLTLAIFIAAGVATAAIGLTLLLSGGDNA- |
4 | 3k07A2 | 0.10 | 0.09 | 0.97 | 1.17 | DEthreader | | E-EFLPSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNSEQKLDEALYHGAVLRV-RAMTVA-IPLLSLFIIPAAYKLMWL |
5 | 6grjG | 0.05 | 0.03 | 0.74 | 0.49 | DisCoVER | | -------------------QA-QIQTYCKGHADLYIQPQI-YQRLSSDTRLVIVNLNNNLISSNGNGYKGLQVQAQ-NAVTAATQS- |
6 | 6y5rA | 0.10 | 0.09 | 0.89 | 1.17 | DEthreader | | -------GPEFGGAVGLCFYLGTTFAAAMYILGAIEIFLVVPSAMLNNMRVYGTAFLVLMVLVFEPTLLLTAAIAELGILIAS-L-- |
7 | 6w2rA1 | 0.12 | 0.11 | 0.98 | 0.51 | CEthreader | | NTDEVREQLQRALEIARESGTKTAVKLALDVALRVAQEAAK--RGNKDAIDEAAEVVVRIAEESNSDALEQALRVLEEIAKAVLKSE |
8 | 4lm6B | 0.14 | 0.14 | 1.00 | 0.58 | EigenThreader | | FSKVITSAADLQALKKFVNKRMDAVNAIVSCIVSDAVSGMVCENGNARAVAIMKATVNGFINNTAQDCSALASEAGGYFDKVSSALA |
9 | 5mtoA | 0.09 | 0.08 | 0.94 | 0.26 | HHpred | | --SELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ-RVERLQKIQNAYSKCKEYSDQLAMQTYEMVDKHIRRLDAD-- |
10 | 1m1jE | 0.14 | 0.14 | 0.98 | 0.38 | MRFsearch | | -KPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNIILSEYNTEMELHYNYIKDNLDNNIPSSLRVLRAVIDSLHKKI- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|