Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MNTIKQILIQDLERINIEEQRDGKPRFNRQFISNHPYLCLAMFVSYLFLAALIWYTPYFSLLSLLAFTVLFIIMSAVLLFEIKPVYRFDDIGVLDLRVCYNGEWFVSEKISDCAIKELCSHPHVSLTIKDEIKRIIQTKGEIHFYDVYIMAFP |
1 | 6aqjA | 0.04 | 0.03 | 0.76 | 0.52 | DisCoVER | | ---------TVY-YDQ-DVKT--DALQ--------GKKIAVVGY-GSQGHAHAQNLKDNGYDVVIGIFDKAVFPVAEAVK-Q-ADVIM--V-LLNALAFAHDVDVFLVAPKGPGHLVRRTFV-------EGSA--VPSLFGIQQAIALSYAK- |
2 | 3n8tA | 0.09 | 0.07 | 0.75 | 0.83 | DEthreader | | --------HIPYVRKHGKWPFG------STWWNEETEWTWPHIYRAEDRMVAIVRFRDLTNRVIEQLARELLILEADWQFLIAKEY---------KRRVL-IHSRDRLLLENPFRPVVVGP-YVSEN-P-PEL--EE--YVEPPEV------- |
3 | 4dvqA | 0.11 | 0.11 | 1.00 | 0.54 | CEthreader | | LDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCIQYTGIVAELLAIKANSMELTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLL |
4 | 4avmA | 0.05 | 0.05 | 0.97 | 0.57 | EigenThreader | | KKFSRAQEKVLQKLSNFYQQQAEGHKLYKDLKN----FLSAVKVMHESSKRVSETGHEELKAIVWNNDLLWEDEKLADQAVRTMEIYVAQFSEIKERIAKRGRKLVDYDSARHHLEAVQNAKKKDEAKTAKAEEEFNKAQTVFEDLNQELLEE |
5 | 1n7qA1 | 0.13 | 0.10 | 0.78 | 0.32 | HHpred | | -QELEGKVADSLSSISSQADRIYLNYKTSANLTAT--------YRKLEEMAKQVTNPYYQDET--VVRTVRDSMEWMHKHVYNSE------------KSIVGNAADYEIGTPRAINNTLMKEYFSDEEIKKYTDVIEKDPEH----------- |
6 | 4il3A | 0.16 | 0.12 | 0.75 | 0.45 | MRFsearch | | --TLVDLPLSYYSHFVLEEKFGFNKLTVKLWITDMKSLTLAYAIGGPILYLFLKIFDTDFLWYIMVFLFVVQILAMTII--------------------------------PVFIMPLFNTPLEDGELKKSIESLADRVDKIFVIDGS----- |
7 | 6es9A1 | 0.12 | 0.09 | 0.79 | 0.69 | FFAS-3D | | LPELESLQSRATEALRALVAPAGK--PQPALLEQHQHAALSWLTTYVESIRQLSLGRIEALILQIGLGEYLGQIAGGIPMSQTEFARLSDLELDW--------------QPGEAAAKLMRGN--TAPARAELARLMQDN-------------- |
8 | 3nfqA | 0.07 | 0.05 | 0.78 | 0.62 | SPARKS-K | | DEKILRLKDQLDIDTLNKRIETSLIAQKVKLLPKVVSVLTILDNNLLQSVRIWLEPGSLPSF-----EIQKSLFAALNDLPVKT----EHLKESGL---------------GRVVIFYTKSKRVEAQLARLAEKLIAEWTRPII--------- |
9 | 3rkoB | 0.11 | 0.10 | 0.99 | 0.65 | CNFpred | | VGLAALVTAFIGVDFFANGEQ-GDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWY-GYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRGDVFLAFALFILYNELGTLNFREMVELAPA |
10 | 6r9tA | 0.02 | 0.02 | 0.90 | 0.83 | DEthreader | | -GD-ETD-YTAVGCAVTTISAVLALLQGNGQ-QDMQLAKAVASAAAALVLKAKSVAQRTDGLQTQVIAAATQCALSTSQLACTVVA----PT--ISPQQHVKAH---SQCA-ISALHTGAKTLS-QNEAASAVVGGMVDSTAATKAGALQCSP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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