Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MNFDITVGDMQVHVETVTLDITDNSAVSQTGGVPDGYVDGDVAASGEIEVDTTNFNLIVEAAKAAGSFRQLEPFDSLFYAKTPTDELRVEAFGCRLKISSLLNIDSKGGEKHKHKIPFDVTSPDFIRINGVPYL |
1 | 5mxn1 | 0.05 | 0.04 | 0.84 | 1.00 | DEthreader | | TPCYISIELTEMLVQQFDHVVTVP---------------QRVHKPFKFTVALNKAVPLLY-NA---LSSGEKLKTVELKWYRTSENFFTTKLEASIVDIHC-EMPHCSDFTQNVTVSLSYRKI-TWDHVGTSGS |
2 | 5mxn1 | 0.08 | 0.07 | 0.84 | 1.00 | DEthreader | | TPCYISIELTEMLVQQFDHVVTVP--------------GQRVHKPFKFTVALNAVPLLYN-AL--SS-G-EKLKTVELKWYRTSQENFTKLENASIVDI--HCEMPHCSFTQNVTVSLSYRKI-TWDHVNGTSG |
3 | 6gkxA | 0.16 | 0.14 | 0.89 | 1.05 | MRFsearch | | --GELWLDGNVAEVKKFQAKMEFTKEDIIIAGQMGT-KYMGYKGKGSITLYHVMHKLIGEKIKRGSE----PRFVAISKLNDSYGAERIAVKNIAFDDLTLADWE--VGVKGEIEAPFTFTEYDFLDI------ |
4 | 6gkxA | 0.18 | 0.16 | 0.89 | 1.13 | SPARKS-K | | TWGELWLDGNKVEVKKFQAKMEFTKEDIIIAGQYMGY-----KGKGSITLYSSRMHKLIGEKIKRGS---EPRFVAISKLNDSYGAERIAVKNIAF--DDLTLADWEVGVKGEIEAPFTFTEYDFLDII----- |
5 | 6j0ba | 0.11 | 0.10 | 0.96 | 1.00 | CEthreader | | YRFIVSVGDEKIPFNSVSGDISYDTIEYRDGVGNWFKMPGQSSTNITLRKGVFPGKTELFDWINSIQLNQVEKKDITISLTNTELLMTWNVSNAFPTSLTSPSFDATSNDIAVQEITLMADRVIMQAV------ |
6 | 6gkxA | 0.17 | 0.16 | 0.90 | 2.16 | HHsearch | | TWGELWLDGNVAEVKKFQAKMEFTKEDIIIAGMGT--KYMGYKGKGSITLYHVSMHLIGEKIKR-G---SEPRFVAIKLNDPDYGAERIAVKNIAFDDLTL--ADWEVGVKGEIEAPFTFTEYDFLDII----- |
7 | 4ksrA | 0.13 | 0.11 | 0.84 | 1.00 | DEthreader | | VDMFIKIGDKEIDVLAWSWGMSQSG--------------KVNVQDLSFTKYIDSTPNLMM-AC--SS-GKHYPQAKLTIRKAGQVEYLIITLKVLVSSVST--GGSGGEDRLTENVTLNFAQV-QVDYQPVKYG |
8 | 4w64A | 0.09 | 0.07 | 0.83 | 1.00 | DEthreader | | KDIYVEFKDGWLEVNSWSHNIRQP--------------AERVEHSMVFVKDLDTSPKLWE-AC--SAG--YTFDEVQIDFYRANRIKLQIKLKVLVSSV--T-PTVNEEGVPTEAFGLKYAAV-EWTYNAVTKK |
9 | 2gujB | 0.12 | 0.10 | 0.88 | 1.28 | HHsearch | | KEGRLFLDGEEAHIKTFEANVEKNKSEVNI-GR-TGHKTTGANGTGTATFYKSKFV-LLDYVKK---GS-DPYFTLQVLDDQSRGTERVTLYDVNFDSAKI--ASLD-----EEEVPFTFED--FDVPEKLSDT |
10 | 4ksrA2 | 0.13 | 0.11 | 0.84 | 1.00 | DEthreader | | VDMFIKIGDKEIDVLAWSWGMSQSG--------------KVNVQDLSFTKYIDSTPNLMM-AC--SS-GKHYPQAKLTIRKAGQVEYLIITLKVLVSSVST--GGSGGEDRLTENVTLNFAQV-QVDYQPVKYG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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