Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MAVITSLAEKRQEKQLRYERKMLRELSLEKLRAKVLEHFVPFYHMYRIFPSVVEEGCIDLAIEAYLLGAHYSRFGYYGEPADSVRQRCAQEEKYLVDTLFDFLCFWGNIDDDIRSESLYYACEQYIGSWWTEGFERGKKRRRLKLH |
1 | 5edlA | 0.07 | 0.05 | 0.82 | 1.00 | DEthreader | | -----SWKVKEIVIMSVISIVFAVVYLLF-THF-GN--LA--MF---GPI--AYE-IY-GIW-FIVSVIAAYMIR-------YSLPVLMLAGMGSSVASFIYDLFSGYAYSPGYLLIMLVIRLISGALLGLLGKAVSDSLAGVLNG |
2 | 4xu4A | 0.10 | 0.08 | 0.85 | 1.00 | DEthreader | | --------------MR-LRISEAVVLFL-LGAVAALIGDHSHVVGVYHTSPWFPILVGAATASLAELRLHLPAPRD---LGDGPGAACGVVIAVIGPAVEIALVQVFAYHPDSDAPFLAPLYFAFGVVAALLGELAVARR-PQ--L |
3 | 1csmA | 0.06 | 0.05 | 0.86 | 1.00 | DEthreader | | ---------KPETVLPQILAPYAPEV---NYNDKIKKVYIEKIIPSKVRDIECLQSLSRRIHFGKFVAEAKFQILYTKLDVEGIMKNITNSAVEEKIL-RL-KAVYGRRIIPEYLVKIYEIVIPITKEVEVEYLLRRLE--E---- |
4 | 6fw2A | 0.06 | 0.05 | 0.79 | 0.70 | DisCoVER | | MQQVG--------TVAQLW-ECTAMG-TSPFLILSEASLADLNSRLEKKV--KATNFR-PNIAEDWDEL-LIG-DV-------EL--K--RVMACS--RCILTTVDPVMSRKEPLETLKYRSPLFGQ-YFVLENPGTIKVDPVYL- |
5 | 3w0lB | 0.07 | 0.05 | 0.82 | 1.00 | DEthreader | | ----------D--PS-QLVQLLRDCDEIVGSATKILLETLLLVAHKVTCLLEILRTYERAHKVTYSKIAALMKQTATSHLYIVLLIQVIC-HAGL-TW-PI--L----FLE-YEGAFIQKFQRELSTKWILDTVTSGAYTLRG--- |
6 | 6s3lF | 0.07 | 0.07 | 1.00 | 0.56 | CEthreader | | SDIALLSLQGFMITFEQIVIGMAMGMVTQFLVQIFVMLGQILGMQSSLGTPLLGQMFMLLATLFFLSSDGHLKMGSLTTVDYRELALWLGIMFKASLAVSLSGIIALLTVNLVGLLLCWYILSGLYTHYEIYWQETEEQICRLIRL |
7 | 4ppuA | 0.11 | 0.11 | 0.96 | 0.95 | EigenThreader | | MDGFNGSVKGTEKLHAKAADSI---NINKKIWNMYFRDLVPRLVKKGDDTAVCDAICLQCLSKRIHYGKFVAESAIKAQDKDALMDMLPTVEDAIKKRVEMKTRTYGQEVYKISPILVGDLYGDWIMPLTKEVQVEYLLRR---LD |
8 | 2fji12 | 0.05 | 0.03 | 0.66 | 0.23 | HHpred | | ------------------SKTWYMGSQAQQIADTLDEYLLDIKPQNSVLFVNFIDNVIGETIIKFLTALSF-EHSFKNKN-----NKFLEAMKRDFEIFYQLFVKVLD-GNESKDTLITQN------------------------- |
9 | 3szrA2 | 0.08 | 0.08 | 0.97 | 0.43 | MRFsearch | | ---DIRLFTRLRHEFHKWSTIIENNEGHKILSRKIQKFFETIVKQQIKALEEPAVDMLHTVTDMDVSIKNFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQIVYGASMEEIFQHLMAYHQEASKRISSHIPLIIQFFM- |
10 | 2bj4B | 0.09 | 0.09 | 0.97 | 0.70 | FFAS-3D | | MGLLTNLADRELVHMINWAKRVFVDLTLHDQVHLLECAWLEILQGKVEGMVEIFDMLLATSEEFVCLKSILNSGVYTTLKSLEEKDHIHRVLDKITDTLIHLMAK--AGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMK-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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