Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ETLVSSIFWTLAPWKNMLLLKHGRIEILDQNTMYGWYELPKQEFLNSKQPVQIFTTKKYWILFRIGPERRRKAGMPIGVYYIEFTR |
1 | 3aabA | 0.06 | 0.05 | 0.74 | 0.71 | DisCoVER | | MYEGYLVVVADLAGFIKARVSQNELIIEAEREYVRKVIRLPYNVAK-DAEISGK--------------------YENGVLTIRIP- |
2 | 1qniA | 0.09 | 0.08 | 0.92 | 0.83 | DEthreader | | ----YYGFWSGGQGGCHHPHIGRYLFINDKTIHGDNTDALNTSPFDGRG-NAYTTLFPGHNHLVLI-LVHD-GPTYEPHDCILVRR |
3 | 3ob8A2 | 0.03 | 0.03 | 1.00 | 0.51 | CEthreader | | ETAEKAAKINDGKRYVSVESSGLHFILDKLLGKIESLKVRDFKNWKKYNIDLMKQNIHGVSVEKGSNGSLAVVTVNSRISPVVFYY |
4 | 3c6fD | 0.04 | 0.03 | 0.91 | 0.55 | EigenThreader | | ---PNIVIRKGSIQEVEYAIMETMVSVLPKSDFDK---PTNKDMQIVSLPITLIID--GEIVLKQEMKKKNIDKTEDVLFAEWHKN |
5 | 3syaA2 | 0.22 | 0.14 | 0.63 | 0.28 | HHpred | | ----------------------------RYVRKDGKCNVPKKRLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVASIRAKLI---- |
6 | 5lqwX | 0.11 | 0.08 | 0.77 | 0.57 | MRFsearch | | -----TIHTCLMGSHSIIQVCTAELRHITGKSRYSNWVPPA------GIRIVCATSSKTQLIISLS---------NYELVYFKIDV |
7 | 5ds0A1 | 0.12 | 0.12 | 0.94 | 0.26 | FFAS-3D | | ---VGFIVSSISKEGYLTFNTLGRVVVRTCKGVHGIIASKPPHILPPDERKKIVEARDFIDIGATSEEEAEESGVKVGDPIVPW-- |
8 | 5d9qD2 | 0.14 | 0.13 | 0.94 | 0.86 | SPARKS-K | | VLTQSPATLSLSPGETAIISQSGSLAWYQQRPGQAPRLVIYSGSTRAADRFSGSRWGADYNLSISNLESG-----DFGVYYCQQYE |
9 | 3ei1A | 0.14 | 0.12 | 0.81 | 0.68 | CNFpred | | ----IKGLWPLRSDDTLVLSFVGQTRVLMLNG--EVEETELMGFVDDQQTFFCGNVAHQQLIQITS----------ASVRLVSQEP |
10 | 6dtmA1 | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | | GVLENTYTSMGIVLKLNFILANSHVGVSMFLLT-LLTIKKMAE-VYG-VDILLPLL-AQ-E------------VVG--ALMVFISF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|