Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | QKLVSATNTENVKNQLLDKLGLSSQQEKQQQTDYTQGLAGLLNTSDGKQLNLNSIGNTPLAEKVKTKACDVVLKQGANF |
1 | 1q9iA2 | 0.03 | 0.03 | 0.75 | 0.64 | DisCoVER | | GFAK-----------NNERVASLKGFISTNQPGAVGDGLKDMYIQVHHTMGGVMIYGAGEVT-GGVHGANR-------- |
2 | 6dg4A | 0.05 | 0.05 | 0.92 | 1.00 | DEthreader | | KLWLNDNVIIGAIFYIADY-VNTPNEPVNDIDTILI----PICESSHWTTTNCLVDAQAYTEQ-LPLQRQRIAAVLLNG |
3 | 1pc6A | 0.04 | 0.04 | 1.00 | 0.51 | CEthreader | | ERNRSLRKLWACLGDVSRQVEWHGRWLDAESFTAALKQQDVVPNLAGNGFVVIGQSTSRMRVGEFAELLELIQAFGTER |
4 | 5fmaA | 0.08 | 0.06 | 0.75 | 0.63 | EigenThreader | | SNPCANGGPTCRCGEKPG---LCRHGGHTGPNCESPCQNGGRPTGDVTHECACNCKVNTCTE----------------- |
5 | 5fvcA2 | 0.16 | 0.10 | 0.62 | 0.23 | HHpred | | -------SDLSYKHAILK------------ESQY------TIKRDVGTTTAV---TPSSLQQEI-TLLCGEILYAKHA- |
6 | 4j0cA2 | 0.23 | 0.18 | 0.76 | 0.57 | MRFsearch | | ------VEEQALSLALKAQ-----------FSTYLNQL--KLTASDGTHLTLNEAGMGSFRDVVRQLLAQTAFDQGTDI |
7 | 5fcdA2 | 0.06 | 0.05 | 0.90 | 0.37 | FFAS-3D | | --YYRRKISDKLINDVYNAINFRPNPLWTLEYWHQFFSERF------TLVSEENHEESQSEDELKADIYDYIFNRQNVF |
8 | 6htuA | 0.11 | 0.10 | 0.91 | 0.92 | SPARKS-K | | ---HMNKSEISQVFEIALKRNLPVNFEVARESGPPHMKNFVTKVSGEFVGEGEGKS----KKISKKNAAIAVLEELKKL |
9 | 5ec0A | 0.13 | 0.09 | 0.66 | 0.53 | CNFpred | | --------VRELEKFIYSNIGKTKM--------------ERRDGNTGQKFDLTDI-----IKKSLKEYTEIKIAQAENT |
10 | 4a01A | 0.08 | 0.08 | 0.91 | 1.00 | DEthreader | | GGGSYAGSAALVSLALFGFVITVDVTKVFIGIGVAGSLVSGV-------QIAISASNKDSGPSLNILIKLMAVESLVFA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|