Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MKATILLAVVVAVFVAGTEAHPHVCTSYYCSKFCGTAGCTRYGCRNLHRGKLCFCLHCSRVKFPFGATQDAKSMNELEYTPIMKSMENLDNGMDML |
1 | 2eemA | 0.26 | 0.09 | 0.35 | 1.04 | HHpred | | -----------------------SCA-SRCKGHCRARRCGYYVSVLYRGRCYCKCLRC-------------------------------------- |
2 | 2eemA | 0.25 | 0.08 | 0.33 | 1.07 | MRFsearch | | --------------------------ASRCKGHCRARRCGYYVSVLYRGRCYCKCLRC-------------------------------------- |
3 | 2eemA | 0.26 | 0.08 | 0.32 | 0.80 | DisCoVER | | ------------------------CASRCKGH-CRAR-CGYYVSVLYRGRCYCKCLR--------------------------------------- |
4 | 4zowA | 0.07 | 0.06 | 0.84 | 0.83 | DEthreader | | LFPLCLVLYEFSTYIGNDISMYLAGGMFLQWLLGPLSDGRRVMGVFIVTCQSLFGGYA-RTAMANVAIAL---FALAISFFQ----------G-LL |
5 | 5nceA | 0.19 | 0.08 | 0.45 | 0.54 | CEthreader | | -----------------RMCKTPSVNNTNCKNVCRTEGFPTGSCDFHVAGRKCYCYKPCP------------------------------------ |
6 | 5ca5A | 0.04 | 0.04 | 1.00 | 0.65 | EigenThreader | | TGRPHGAHAESAKEAIDVKELSPTVSNEMLYHAFSHFGDVRAVHIVDEKGGEGIVEFERERELGPRFPTPNSFEYVYGMKWKELYVVEQKRRAQLD |
7 | 5ix5A | 0.20 | 0.11 | 0.56 | 0.41 | HHpred | | ------------------DIDFSTCAQGLCITSCSMQNCGTGSCKKRSGRPTCVCYRCANGDIPLGALIKRG------------------------ |
8 | 5ix5A | 0.21 | 0.09 | 0.45 | 0.78 | MRFsearch | | --VPILKKA----------------AQGLCITSCSMQNCGTGSCKKRSGRPTCVCYRCANG----------------------------------- |
9 | 2eemA | 0.25 | 0.08 | 0.33 | 0.50 | FFAS-3D | | --------------------------ASRCKGHCRARRCGYYVSVLYRGRCYCKCLRC-------------------------------------- |
10 | 1zveA | 0.19 | 0.12 | 0.67 | 0.94 | SPARKS-K | | -------NSVRDAYIAGPHNCVYECRNEYCNDLCTKNGAKSGYCQWVGKYNGCWCIELPD-NVPIRVPGKCH------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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