>PF10681 (214 residues) LVGTWSSKSRKVITGPDFYDPVNEKFKEPSHTGISYSFTEDGYYEEAYYRAVANPSSPDC PKGIMQWQHGKYSKEPNGSLILTPFEVDGRQLLSSPCAGDQSAYTRYNQSELFKQYEVQT DKFHNVLRLNLYQFDGTPVIPMYLVYRPPQMLPTQTLNPTAQKPAATGKSKRDISDEETI EPLNKHAFVKRSEPDTMDKWWWFGLFMTSVGGVA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LVGTWSSKSRKVITGPDFYDPVNEKFKEPSHTGISYSFTEDGYYEEAYYRAVANPSSPDCPKGIMQWQHGKYSKEPNGSLILTPFEVDGRQLLSSPCAGDQSAYTRYNQSELFKQYEVQTDKFHNVLRLNLYQFDGTPVIPMYLVYRPPQMLPTQTLNPTAQKPAATGKSKRDISDEETIEPLNKHAFVKRSEPDTMDKWWWFGLFMTSVGGVA | |||||||||||||||||||
1 | 4gzvA | 0.12 | 0.06 | 0.52 | 0.72 | DisCoVER | LKGIWQLCH-------YVSESPDVPGALK-PSNTFKVLSDDGRIVNFTII---------PGADAIITGYGTYKQLTDDSYKESIE--KNIHLP-------------LDNQDNILEFEI--K-DNDYLHLKYFIKELNTWYYETWK------------------------------------------------------------------RV- | |||||||||||||
2 | 3rbyA | 0.09 | 0.06 | 0.66 | 0.67 | DEthreader | HMPALLK-R--LLFQVG---------PNERTFTLSSVSTD-G-HYISLRPFVKPSGDELSFPFEWAFAGVKANDQGNGVVTQDFN-FWLDTNV--------YLNVRGEVNTTWKNWD-S---------GCVEETG-REMWQPVPEDL---------------------------------SIVLKVLVGFL-E---IRLFLLSY-IPQ-YEYHA | |||||||||||||
3 | 1oh2Q | 0.05 | 0.04 | 0.79 | 0.69 | CEthreader | SSKTALLYGHGLGAEVKGIGSDGALRPGADTWRIASYGTTPAPAMLAQRSKDRYAD----GDSYQWATFNLRLIQNQNFALAYEGSYQYMDLKPEGYNDRQAVNGSFYKLTFAPTFKVSIGDFFSRPEIRFYTSWMDWSKKLNNYASDDALGSDGFNSGGEWSFGVQMETAF------------------------------------------ | |||||||||||||
4 | 2x4mA | 0.05 | 0.03 | 0.64 | 0.70 | EigenThreader | YSFWTSLAS-GSGNMDDYAWMEWTDHSSHPATNVNHANEENQETRFSWTATGGFP--KGVRVIGYNQRFSMPYIGDFLFKFSVRA---HDNDEHYMRD---LTFREKTSGSRVINAGYYVTP--NAKVFAEFTYSNSGDAGLQYRFGG------------------------------------------------------------------ | |||||||||||||
5 | 5y31B | 0.13 | 0.09 | 0.71 | 0.39 | HHpred | ------------------WDHVEKTFDNITGTSTVVPIVIE----TQLYVIVAQLFGGS---HIYKRDSNKFIIEIRKPNDIETFKIENNWYFVVADKAGFTTIYKWNGNGFY-SHQ-SLHAWYRDTDVEYLEIVRTPQTPHLILSSS-SQRPVIYQW--------NK--ATQLFTNQTDIPNMEDYAVKH----------------------- | |||||||||||||
6 | 5y31B2 | 0.12 | 0.05 | 0.44 | 0.48 | MRFsearch | --------------------------------SLSIDTFS---YLNDEYVVIAQPFT--GKCIFLEWDHVTFRNYDNSTVVCKPIVIETQLYVIVAQLFGGSHIYKRDSFNKFIKIQDINV--QAPRSFTHVSI-------------------------------------------------------------------------------- | |||||||||||||
7 | 4gzvA | 0.14 | 0.08 | 0.59 | 0.38 | FFAS-3D | LKGIWQLCHYVSES--------PDVPGALKPSNTFKVLSDDGRI----VNFTIIPGADA-----IITGYGTYKQLTDDSYKESI------EKNIHLPLDNQDNILEFENDYLHLKYFIKSDLNGNELNTWYYE--------TWKRVEPAKF-PEDIVR-------------------------------------------------------- | |||||||||||||
8 | 6n2cA2 | 0.11 | 0.09 | 0.80 | 0.85 | SPARKS-K | SSDKIIFNNNITVTTRNMYSSSDITLRSDNNRKADNIIVKNGSFINLMYTITFNGNNNRLESNSLLFSDGTISLSGKDEIVANALFCDTLDIR----NGSSNL-VTINEFAYFNKLNIWTDK------MVLKS--NSK-------------LFGGDIEIRNDGILSADVGTVVYQIPYPTIPAIIEEIKKNTFPTNWI---------------- | |||||||||||||
9 | 5z5dA | 0.08 | 0.03 | 0.43 | 0.82 | CNFpred | -------------------------------TFIGRRQE--HFVCNVSTLLEFKPNQDNEEAGLTVYMNE------KHHYEIALTKKRINVVLKKTVGDIQVVVNSLEYFSNTIIFSIQANP--EEYKFSFVDP-------------------------------------------------------------------------------- | |||||||||||||
10 | 2c4iA | 0.04 | 0.02 | 0.59 | 0.67 | DEthreader | PTFGFTVNW---------------------ESTTVFTGQCFVLKTMWLLRSSVND--IGDDKATRVGIN-IFTRL--GKWTN---------------------------DLGSNMTIGAVN--RGEFTGTYITA--IKESPLHGTQNTSTRSDWKATR---------------------NDLGSN--MT-IGAV-NSRGETQNTINKR------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |