>PF10679 (212 residues) MFSKLFGKKETKTTPKAPEIMGLYLGGSFELDPLKLRLIEPQLMIEKAASQHLIQAVGEV NLDTGGKILRFYTDDDAFLQVILDGGDTENHITDVKLWYFYETKTIGSEAQWKQTIASGV SKPTYQLEDTEYQRVWDAVGDESPPVAMTEKTYEQDGDTSETDQFVMLYERQLDDDETET LLVTAEEKLVNNNFDRCLVVSTGFNIGQADIK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | MFSKLFGKKETKTTPKAPEIMGLYLGGSFELDPLKLRLIEPQLMIEKAASQHLIQAVGEVNLDTGGKILRFYTDDDAFLQVILDGGDTENHITDVKLWYFYETKTIGSEAQWKQTIASGVSKPTYQLEDTEYQRVWDAVGDESPPVAMTEKTYEQDGDTSETDQFVMLYERQLDDDETETLLVTAEEKLVNNNFDRCLVVSTGFNIGQADIK | |||||||||||||||||||
1 | 5jmdA | 0.14 | 0.10 | 0.72 | 1.26 | CNFpred | ---------------------------TVTLDNKNLETTESVTKLWQP--GNIQTLVTENPSYKNFKHRRSVFFNTYFVIVDEVSG---SAKGSVNLHYQMPK-----------------GEIANSREDMTFLTQFE------DGSNMKLQCFGP--EGMSMKKEPGWCSTAY-RKRYKRMNVSFNVKKDN-ENAVRYITVIYPVKKSADAP | |||||||||||||
2 | 6blkC | 0.04 | 0.03 | 0.69 | 0.59 | DisCoVER | DMTEVIDRSLER-VRRRRSD--IEFEVTV-TP-WQV-IGDSGL-GRAVLNVLDAAKWS----------PPGGRVGVRLYQI-----------DPGHAELVI-TDQGP----G--IPPQER----------------------HLVFERFFRSASARSMPGSGLGLAIV--KQVVLKHGGALRVDYADPA---AQPPGTAIHIVLPG---RP- | |||||||||||||
3 | 3hfvA | 0.10 | 0.08 | 0.78 | 0.83 | DEthreader | ------LLGKSYPQD----------TRVGRLQQHPLWLIKE-RVKEHSVYDNLSPVNFIHPS---GDNAHTAHDLLVVGVYRRDQI----HYPIFHQLEA-VRLFSKLHTEAVKLVEFDLKQ-LTRLAHFLEIRW------VDCYFPF---------------THSFEMEINFHGEWLEVLGCGVMQVNSGAQDRIGWAFGLGLERIRLFWC | |||||||||||||
4 | 5a53C | 0.09 | 0.08 | 0.94 | 0.59 | CEthreader | ---------LVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRFNRKNDIMSPLEFFSEKNDCSLMVLMTSSKNNMTFIRTFGYKIYDMIELMVADNFKLLSDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQIKS---LFLDFFRGESTDLQDVAGLQHVISMTIQGDFQDGEPLPNVLFRVYKLKSYKIELVEIGPRLDFKIGRIHTP | |||||||||||||
5 | 4wsbC | 0.08 | 0.07 | 0.87 | 0.65 | EigenThreader | DHMAVIKKYTSGRQEKNAMK-----YPISASSRIREMIPEKDETKDAGSNRVLVSFGPVKFYNQVKVRKRVDINPRRTRFLPIAGATSSTYVE---VEQQYTPISDEQAVNICKAALGIRINNSFSFGGYNFKRVG-------SSQRTEKAVLTGNLQTLTMTIFEGFNVSGK---RASAVLKKGA---------QRLIQAIIGGRTLEDIL | |||||||||||||
6 | 6o38G | 0.10 | 0.04 | 0.44 | 0.23 | HHpred | -------PSEKERLSQQQIVFNEVKG-VIKYDPKVIELKGDTVKFQLEYGINRTGKIVEIEPDQDIVRWTGRFDQGNFFTITQSQK--DHYTI--QIFTEKGNYS----------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 2hz7A | 0.07 | 0.05 | 0.73 | 0.45 | MRFsearch | --DGLVGMPGGGRVAPEEAVRDVPLTRELYIERDDFSPAPPGGTVRLR-GAGIIRADDFGTDEQVTHIRATLLGEAGVIHWVSAE-----RALPAEFRLYDRLFHPEGENGFMRYLT-------------------------PDSLRVLRGYVEPSDTRYQFERQGYFWRDPV--ELERVLVFGRIITL----------------------- | |||||||||||||
8 | 4i0oA2 | 0.12 | 0.08 | 0.68 | 0.54 | FFAS-3D | --------------------VGFSDGYLALWN-----KSKREYYTQLEGGRVPVHAVAFQEPE----------NDPRYLWAVQSTQDSEGDVLSLHLLQLAFGD-----------------RKCLASGQILYEGL----------EYCEERYTLDLAGTSNTKLLGCQSIERFPLSPDTSVSVFTWQVNIYGQGKPSVYLGL-FDINR---- | |||||||||||||
9 | 4ijyA | 0.16 | 0.15 | 0.92 | 0.68 | SPARKS-K | ---------DIRGCPTLETP--LKLTFTEDIQPRGWRGVGQTVPVKYAATEHEIHIYVEFADKNGAYSYIMYTNGEYIYKVVISDWNKGQDFKTVEVFHFQNNRPRNSYENVKSRINNNISK-SYSKEQLS----TYVHDDGTDSLFLYQKLSRASLKESQINYYQLRFNGVNLGYAQEYILFGGEDNGSFKNESLDLRLMDNASFNRTDFS | |||||||||||||
10 | 3wiqA | 0.10 | 0.08 | 0.79 | 1.06 | CNFpred | --------------------NPIGL--RIYINREFLNPL-LEFKRVLDLKQGILYRKLRLKDVRITTIEGFRFVSKNLIVQKYDVVCE-NYSAVLNVESFIDATT---------VNSKDVPNDRVKHYEIDKKKDFA------DGIYLGITTKD---KKYKVGIASSTKVLLNDLGYIITENFEVEAKQ---GERYEIEKLTVLVSSREKNV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |