Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | EVYLQEKEYIDTAVIPLIPLTLEKNVKSIASMGEFVQIIVGELERQFKGRVFLLPPFTYFTSESMEEKIKRIADWTSQLTANGMKHIFYVTSDTEWKAGEASLPGTLLWLPSIPLEHMDEKYKQQIVMDQTSQLMNLLISKW |
1 | 3no4A | 0.09 | 0.08 | 0.96 | 1.33 | DEthreader | | QEVEAYLQQSKGIIFPIGSTEQ--P-GLIGTDAICAEAIAAGVGDATG--AIVGPTINVGALLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAFYCQVANWFTSEVAPATPEHGKQFYDLAVKELSNGYLEFV |
2 | 1q3kA | 0.08 | 0.08 | 0.96 | 1.33 | DEthreader | | --ARVAAG-DCVLMLPVGALEQHGHHMCMNVDVLLPTAVCQRVAERIG--ALVLPGLQYGKSLDGATLTGTVQDIIRELARHGVRRLVLMNGHYENSMFIVEILKVVVLSYWEFETAASREKGELILEVCVQGIADAIGQEF |
3 | 3no4A | 0.09 | 0.08 | 0.85 | 2.18 | HHpred | | STWQEVEAYSKGIIFPIGSTEQHGTGLIGTDAIC-AEAIAAGVGDAT--GAIVGPTINVG-ALHPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAHQQVCQVANW---F-CGSKLAKELYGD------------- |
4 | 3no4A | 0.09 | 0.08 | 0.98 | 0.80 | DisCoVER | | QEVEAYLQQSKGIIFPIGSTEQHGPTGLIGTDAICAEAIAAGVGDAT--GAIVGPTINVGATIRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAAFVQCQVANWELTQYVTPEHGKQFYDLAVKELSNGYLEF- |
5 | 3no4A | 0.09 | 0.09 | 0.96 | 1.00 | MRFsearch | | --WQEVEAYSKGIIFPIGSTEQHGTGLIGTDAIC-AEAIAAGVGDAT--GAIVGPTINVGALLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATIANAQQVQCQVANWNPGLATPEHGKQFYDLAVKELSNGYLEFV |
6 | 1q3kA | 0.09 | 0.08 | 0.98 | 0.95 | SPARKS-K | | LTWKEYEARVCVLMLPVGALEQHGHMCMNV-DVLLPTAVCQRVAERIG--ALVLPGLQYGYKSQGATLTGTVQDIIRELARHGVRRLVLMNGHYENSMRYAGIHDFKVVVLSSSAKTASREKGELILEVCVQGIADAIGQEF |
7 | 3no4A | 0.10 | 0.10 | 0.97 | 0.89 | MAPalign | | --VEAYLQQSKGIIFPIGSTEQHGPTGLIGTDAICAEAIAAGVGDAT--GAIVGPTINGAISLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAATCQVANWSEVALTQYTPEHGKQFYDLAVKELSNGYLEFV |
8 | 3no4A | 0.08 | 0.08 | 0.99 | 0.87 | CEthreader | | QEVEAYLQQSKGIIFPIGSTEQHGPTGLIGTDAICAEAIAAGVGDAT--GAIVGPTINVGASLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAVQCQVANWFCGSVYKLAKELYGDQEGSHATPSEVALTQYV |
9 | 2mt9A | 0.14 | 0.13 | 0.93 | 0.48 | MUSTER | | DSPKLMEQY-D-VLILGIPTWDFGEIQ------EDWEAVWDQLDDNLEGKIVAL--GLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALETNQYDLSDERIQSWCEQILNEMAEHY |
10 | 3no4A | 0.08 | 0.08 | 0.95 | 2.95 | HHsearch | | STWQEVEAYSKGIIFPIGSTEQHGTGLIGTDAIC-AEAIAAGVGDAT--GAIVGPTINVG-ALHPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAHQQVQCQVA--NWF-CGSKLAKELYGSHATPSEVALTQYV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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