>PF10647 (262 residues) GSMVSVTETGVTPVPGYFGSARNMRSLALSQDGKLVAAVADTGRPAPEPASSLMVGAYED GAASVLEGGAITRPTWAPDNSAIWAAVNGNTVIRVLREPGTGRTSVVNVDAGAVTALGAT ITELRLSRDGVRAALIVDGKVYLAIVTQTPGGQYALTNPRAVAIGLGSPALSLDWSTSDT IVVARAASDIPVVQVAVDGSRMDALPSRNLTAPVVAVDASTTTEFVADSRAVFQLNNNDP AGDRYWREVPGLTGVKAIPVLP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | GSMVSVTETGVTPVPGYFGSARNMRSLALSQDGKLVAAVADTGRPAPEPASSLMVGAYEDGAASVLEGGAITRPTWAPDNSAIWAAVNGNTVIRVLREPGTGRTSVVNVDAGAVTALGATITELRLSRDGVRAALIVDGKVYLAIVTQTPGGQYALTNPRAVAIGLGSPALSLDWSTSDTIVVARAASDIPVVQVAVDGSRMDALPSRNLTAPVVAVDASTTTEFVADSRAVFQLNNNDPAGDRYWREVPGLTGVKAIPVLP | |||||||||||||||||||
1 | 5f30A | 0.07 | 0.07 | 0.93 | 1.33 | DEthreader | HHMAAFSDPYKEFEFVIYAALGLGVHVTITPEADGYAVGDG-Q------KDICAEFDRETDMVYAWAFDANDALVFDPRGKWAVASMRLPGVCVVFDRE---NQVPVAVLPSQFIEVISAGHQAGFSPDGQSFLFMNSNNIMVWDSSNHD-DPTTWEKKAVVESDWGYNTFHMVFTPDAKKIYVTMWWPNGIAVIDANWEVLKEVD-L-GP-DMHTLAITYDFVVGTLSSAIVVMET----ETDEVLGFLPSPMGHHDNVSR | |||||||||||||
2 | 3dm0A | 0.12 | 0.11 | 0.89 | 2.95 | HHpred | KSIILWKLTKGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG--------ELRLWDLAAGVRRFVGHKDVLSVAFSLDNRQIVSASRDRTI-KLWNT-LGEC--KYT-ISEGGEGHRDWVSCVRFSPNTLTIVSASDKTVKVWNLS---NCK----LRSTLAGHT-GYVSTVAVSPDGSLCASGGKGVVLLWDLA-EGKKLYSLEAN---SVIHALCFSPNRYWLAATEHGIKIWDL-----ESKSIVEDLKVDLKKLNWS | |||||||||||||
3 | 2ymuA2 | 0.14 | 0.12 | 0.88 | 0.45 | DisCoVER | VWGVAFSPDGQTIASASVLHSSSVWGVAFSPDGQTIASASD--------DKTVKLWNRNGLLQTLTGHSSVRGVAFSPDGQTIASASDDK-TVKLWNR---N-GQLLQT-L-TG--HSSSVWGVAFSPDDQTIASASDKTVKLWNR-----N-GQL--LQTLTGHS-SSVRGVAFSPDGQTIASASDD-KTVKLWNRNGQLLQTLTGHSS--SVRGVAFSPGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFS- | |||||||||||||
4 | 5wlcLO | 0.17 | 0.14 | 0.85 | 0.28 | MRFsearch | GEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSK-------LGQLLVYEWQSESYILKQQDSTNSLAYSPDGSRVVTASED-GKIKVWDITS-------GFCLATFEEHTSSVTAVQFAKRGQVMFSSSDGTVRAWDLIR-------YRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLFDIHVWSVQT-GQLLDALSGH--EGPVSCLSFSQENSVLASADKTIRIWSIFG----RSQQVEPI---------- | |||||||||||||
5 | 3mkqA | 0.09 | 0.08 | 0.89 | 1.56 | SPARKS-K | GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGVVDFEAHDYIRSIAVHPTKPYVLSGSDDLT-VKLWNWENNW------ALEQTFEGHEHFVMCVAFNPKPSTFASGCLDTVKVWSL---GQST----PNFTLTTGQERGVNYVDYYPDKPYMITASDDTIKIWDY-QTKSCVATLEGHMS--NVSFAVFHPTLIIISGSDGTLKIWNS-----STYKVEKTLNVGRSWCIAT | |||||||||||||
6 | 5yzvA | 0.17 | 0.14 | 0.85 | 0.37 | MAPalign | KLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDD--------ATVRLWDV--RAVFEGHTHYVLDIAFSPDGSMVASGSRD-GTARLWNVA---TGTEHAV----LKGHTDYVYAVAFSPDGSMVASGSRGTIRLWDVA-------TGKERDVLQAPA-ENVVSLAFSPDGSMLVHGSDSTVHLWDV-ASG--EALHTFEGHTDWVRAVAFSPDGLLASGSDDRTIRLWDVAAQEEHTLEGHTE---------- | |||||||||||||
7 | 5yzvA | 0.16 | 0.15 | 0.89 | 0.30 | CEthreader | KLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDA--------TVRLWDVR--AVFEGHTHYVLDIAFSPDGSMVASGSRDG-TARLWNVATGT-------EHAVLKGHTDYVYAVAFSPDGSMVASGSRGTIRLWDVAT-------GKERDVLQAPA-ENVVSLAFSPDGSMLVHGSDSTVHLWDVA-SGEALHTFEGHTD--WVRAVAFSPDGALLASDDRTIRLWDVA-AQEEHTTLEGHTEPVHSVAFHP | |||||||||||||
8 | 2ojhA | 0.14 | 0.13 | 0.90 | 1.11 | MUSTER | SSIEIFNIRTRKRV--VWQTPELFEAPNWSPDGKYLLLNSEG-------LLYRLSLAGDPSPEKVDTGFANNDHGISPDGALYAISDKVEFAIYLLPS-TGGTP--------RLTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSDIDSG------VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTQQIWRVRVDGSSVERITDS--AYGDWFPHPSPSGDKVVFVDLDVRVQLDDGGNVETLFDLFGGQGTNSPNWSP | |||||||||||||
9 | 3dm0A | 0.13 | 0.11 | 0.87 | 0.71 | HHsearch | KSIILWKLTKGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG--------ELRLWDLAAGVRRFVGHKDVLSVAFSLDNRQIVSASRDRTI-KLWNT-LGE-------CKYTIEGHRDWVSCVRFSPNTLTIVSASDKTVKVWNLS---NCK----LRSTLAGHT-GYVSTVAVSPDGSLCASGGKGVVLLWDLA-EGKKLYSLEAN---SVIHALCFSPNRWLCAATEHGIKIWDL-----ESKSIVEDLKVDLKSLNWS | |||||||||||||
10 | 2ivzD2 | 0.16 | 0.15 | 0.89 | 1.29 | FFAS-3D | --VSDYDGYNQFVV---HRSPQPLMSPAWSPDGSKLAYVTFES-----GRSALVIQTLANGAVRASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ------VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-----PQRITWEGSQNQDADVSSDGKFMVMVSSQ--HIAKQDLATGGVQVLS-STFLDETPSLAPNGTMVIYSSSQGLNLVSTDGRFK----ARLPATDGQVKFPAWP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |