Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | GSMVSVTETGVTPVPGYFGSARNMRSLALSQDGKLVAAVADTGRPAPEPASSLMVGAYEDGAASVLEGGAITRPTWAPDNSAIWAAVNGNTVIRVLREPGTGRTSVVNVDAGAVTALGATITELRLSRDGVRAALIVDGKVYLAIVTQTPGGQYALTNPRAVAIGLGSPALSLDWSTSDTIVVARAASDIPVVQVAVDGSRMDALPSRNLTAPVVAVDASTTTEFVADSRAVFQLNNNDPAGDRYWREVPGLTGVKAIPVLP |
1 | 5f30A | 0.07 | 0.07 | 0.93 | 1.33 | DEthreader | | HHMAAFSDPYKEFEFVIYAALGLGVHVTITPEADGYAVGDG-Q------KDICAEFDRETDMVYAWAFDANDALVFDPRGKWAVASMRLPGVCVVFDRE---NQVPVAVLPSQFIEVISAGHQAGFSPDGQSFLFMNSNNIMVWDSSNHD-DPTTWEKKAVVESDWGYNTFHMVFTPDAKKIYVTMWWPNGIAVIDANWEVLKEVD-L-GP-DMHTLAITYDFVVGTLSSAIVVMET----ETDEVLGFLPSPMGHHDNVSR |
2 | 3dm0A | 0.12 | 0.11 | 0.89 | 2.95 | HHpred | | KSIILWKLTKGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG--------ELRLWDLAAGVRRFVGHKDVLSVAFSLDNRQIVSASRDRTI-KLWNT-LGEC--KYT-ISEGGEGHRDWVSCVRFSPNTLTIVSASDKTVKVWNLS---NCK----LRSTLAGHT-GYVSTVAVSPDGSLCASGGKGVVLLWDLA-EGKKLYSLEAN---SVIHALCFSPNRYWLAATEHGIKIWDL-----ESKSIVEDLKVDLKKLNWS |
3 | 2ymuA2 | 0.14 | 0.12 | 0.88 | 0.45 | DisCoVER | | VWGVAFSPDGQTIASASVLHSSSVWGVAFSPDGQTIASASD--------DKTVKLWNRNGLLQTLTGHSSVRGVAFSPDGQTIASASDDK-TVKLWNR---N-GQLLQT-L-TG--HSSSVWGVAFSPDDQTIASASDKTVKLWNR-----N-GQL--LQTLTGHS-SSVRGVAFSPDGQTIASASDD-KTVKLWNRNGQLLQTLTGHSS--SVRGVAFSPGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFS- |
4 | 5wlcLO | 0.17 | 0.14 | 0.85 | 0.28 | MRFsearch | | GEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSK-------LGQLLVYEWQSESYILKQQDSTNSLAYSPDGSRVVTASED-GKIKVWDITS-------GFCLATFEEHTSSVTAVQFAKRGQVMFSSSDGTVRAWDLIR-------YRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLFDIHVWSVQT-GQLLDALSGH--EGPVSCLSFSQENSVLASADKTIRIWSIFG----RSQQVEPI---------- |
5 | 3mkqA | 0.09 | 0.08 | 0.89 | 1.56 | SPARKS-K | | GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGVVDFEAHDYIRSIAVHPTKPYVLSGSDDLT-VKLWNWENNW------ALEQTFEGHEHFVMCVAFNPKPSTFASGCLDTVKVWSL---GQST----PNFTLTTGQERGVNYVDYYPDKPYMITASDDTIKIWDY-QTKSCVATLEGHMS--NVSFAVFHPTLIIISGSDGTLKIWNS-----STYKVEKTLNVGRSWCIAT |
6 | 5yzvA | 0.17 | 0.14 | 0.85 | 0.37 | MAPalign | | KLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDD--------ATVRLWDV--RAVFEGHTHYVLDIAFSPDGSMVASGSRD-GTARLWNVA---TGTEHAV----LKGHTDYVYAVAFSPDGSMVASGSRGTIRLWDVA-------TGKERDVLQAPA-ENVVSLAFSPDGSMLVHGSDSTVHLWDV-ASG--EALHTFEGHTDWVRAVAFSPDGLLASGSDDRTIRLWDVAAQEEHTLEGHTE---------- |
7 | 5yzvA | 0.16 | 0.15 | 0.89 | 0.30 | CEthreader | | KLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDA--------TVRLWDVR--AVFEGHTHYVLDIAFSPDGSMVASGSRDG-TARLWNVATGT-------EHAVLKGHTDYVYAVAFSPDGSMVASGSRGTIRLWDVAT-------GKERDVLQAPA-ENVVSLAFSPDGSMLVHGSDSTVHLWDVA-SGEALHTFEGHTD--WVRAVAFSPDGALLASDDRTIRLWDVA-AQEEHTTLEGHTEPVHSVAFHP |
8 | 2ojhA | 0.14 | 0.13 | 0.90 | 1.11 | MUSTER | | SSIEIFNIRTRKRV--VWQTPELFEAPNWSPDGKYLLLNSEG-------LLYRLSLAGDPSPEKVDTGFANNDHGISPDGALYAISDKVEFAIYLLPS-TGGTP--------RLTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSDIDSG------VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTQQIWRVRVDGSSVERITDS--AYGDWFPHPSPSGDKVVFVDLDVRVQLDDGGNVETLFDLFGGQGTNSPNWSP |
9 | 3dm0A | 0.13 | 0.11 | 0.87 | 0.71 | HHsearch | | KSIILWKLTKGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG--------ELRLWDLAAGVRRFVGHKDVLSVAFSLDNRQIVSASRDRTI-KLWNT-LGE-------CKYTIEGHRDWVSCVRFSPNTLTIVSASDKTVKVWNLS---NCK----LRSTLAGHT-GYVSTVAVSPDGSLCASGGKGVVLLWDLA-EGKKLYSLEAN---SVIHALCFSPNRWLCAATEHGIKIWDL-----ESKSIVEDLKVDLKSLNWS |
10 | 2ivzD2 | 0.16 | 0.15 | 0.89 | 1.29 | FFAS-3D | | --VSDYDGYNQFVV---HRSPQPLMSPAWSPDGSKLAYVTFES-----GRSALVIQTLANGAVRASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ------VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-----PQRITWEGSQNQDADVSSDGKFMVMVSSQ--HIAKQDLATGGVQVLS-STFLDETPSLAPNGTMVIYSSSQGLNLVSTDGRFK----ARLPATDGQVKFPAWP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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