Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | GMELVTPVRRNVPRKNTIPGSEGVKRYRLEAMKSHYGRVRRAIPSPVKSSATLNSTAKRKIESEQESTAWSPKPLFPPRLSLERINKNLASKIDTINFERIPE |
1 | 4cg4A | 0.07 | 0.06 | 0.82 | 1.17 | DEthreader | | -----------SEVALEHKKQKQLEHLKKLRKSGEEQRSYGEEKAVSFLKQTEALKQRVQRKLEQVYYFLEQQEHFASDVGQMVGQIRKAYDTRQ-------- |
2 | 4ifaA2 | 0.01 | 0.01 | 0.77 | 0.65 | DisCoVER | | KENNQQIFDLTNIIRSR--------------HN-LP-LLA-WDQQTADVAISFQLAGENIAGVAALWLNSEGHRNLLEQFTG--LG--VG--VYFYTQNFIR- |
3 | 1x0aA | 0.08 | 0.06 | 0.77 | 0.83 | DEthreader | | FAWALL---------RKAGADEPSAKAVAWALVEADLRGV--------GS--LL-RLPVYVRRLEGLVNGFGHFGMGKLPVVAELKA-LGERYVPWRDDA--- |
4 | 6w1cE | 0.10 | 0.10 | 1.00 | 0.57 | CEthreader | | QFASQIGLTKHDHTKIRYAEGHDIAEAARSTLKVHSSSPGERISVSFVDSKNEHRTCRIAYHHEQRLIGRERFTVRPHHGIDIPDRTILSQQSGNVKITVNGR |
5 | 5g6rA | 0.04 | 0.04 | 1.00 | 0.47 | EigenThreader | | NGTPNQARKLADFVTSDAGSASLHDLALLFSGFLHAVALIKSGQDTSTTATGLLPLLTPWYLSSIAKQIDDGDYATQGSNLGMQLAGVENIIRAGEEQRVSSQ |
6 | 3o3mA2 | 0.10 | 0.08 | 0.75 | 0.28 | HHpred | | --------------------EEVMISAENGRLWKYSMSLPASSPSPMNGFDLFTYMLEDNMKTGKYRIMM---EGIPCWPYIGYKMKTLAKFGVNMTGSV--- |
7 | 5gnjG | 0.23 | 0.14 | 0.58 | 0.53 | MRFsearch | | ---------------------VEAERQRREKLNQRFYALRAVVPNVMDKASLLGDAIVVKTESEKLQ----------IKNQLEEVKLELAG------------ |
8 | 5ks8C3 | 0.16 | 0.13 | 0.77 | 0.43 | FFAS-3D | | -----------------VPGGNQLKEDRMDAVLDEIPRVREDLPLVTPTSQIVGTQAVLNVMTGARYKSVTGHYGKAPSTVNPDVRNLAVGNAQVI------- |
9 | 5yfpE2 | 0.09 | 0.09 | 0.98 | 0.79 | SPARKS-K | | NVKFKEQLIDFENHSVIITSMQNLINDVETVIKNESKIVKRVFEEKHVIQLFIQRVFAQKIEPRFEVLLRNSLSISNLAYGLFTLFGKFTKSLIDYFQLLE-- |
10 | 4eiwA | 0.17 | 0.09 | 0.51 | 0.51 | CNFpred | | --------------------AKRIDEAVRRLIEEQYQRVKALLL---EKREVLERVAETLLERE--------------TLTAEEFQRVVE------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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