Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MFSTIALFWALCLVCIINMMRYFSSLRALLSILRQSDPLLYQSVDGNGFFTTHGQLNKQIRLVNYINSQRYLDHHDPEVVLRCERLRKQFILTSALSGLVVICLISM |
1 | 4e40A | 0.05 | 0.05 | 0.88 | 1.17 | DEthreader | | IAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLAA--C---SESTN-Y-----DVT-AKS-LAADKLPGVEDNAVKTTFQSILTSLDNLDKDVKSVEQRAEEE |
2 | 4wjgE | 0.06 | 0.06 | 0.90 | 1.17 | DEthreader | | VLTARDHVHKHRAAALQGWSDAKEKGDAAAEDVWVLLNA--AA-KCSRY--S--SS--STSETE-LQKDAAAVGGSA-HKSKYGDVLNKFKLSNASVGAVRDTSGRG |
3 | 5oqlT | 0.07 | 0.06 | 0.85 | 1.17 | DEthreader | | SVKNDNHIIQGIATLDALDKSINQGAMRVREWYGWHFPELIRIV----SD-----------NITYAK-VVLAIGNLQMVRDLASNVTSMADYRRILAESLDKKMSEV |
4 | 4e40A | 0.05 | 0.05 | 0.89 | 1.17 | DEthreader | | VAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLAA--A--CSEST--N-Y-D--VT-AKS-LAALDLPGVEDNAVKTTFQSILTSLDNLDKDVKSVEQRAEEL |
5 | 2onjA1 | 0.08 | 0.07 | 0.95 | 0.55 | DisCoVER | | ---RVINDVEQTKDFILTGLNIWLDCITIIIAALFIFPFYILTLTRERSALAENFLTRALKHFAAINTVTDI-GPLELLFGPLRRLVASFTTLTQSFASMDRVFQL- |
6 | 5vjsA | 0.11 | 0.10 | 0.96 | 1.17 | DEthreader | | EQQLAQEFQQLLQEIQQLGRELLKGELQGIKQLREASKSVLQKILEDEKHEL---LAKILEDEEKH-IELLELGDERELLKGELQGIKQYRELQQLGQKAQQLVQKQ |
7 | 3jacA | 0.02 | 0.02 | 0.82 | 0.64 | CEthreader | | ---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
8 | 7cu3A8 | 0.08 | 0.07 | 0.92 | 0.63 | EigenThreader | | TLKMLLLTVVVSMYKSFIIVGMFLLLLCYAFAGVVLF--GTVKANFSSAGK------AITVLFRIVTNKIMHDCMGNGALMYFCSFYVIINLLVAIIVENFSLFYS- |
9 | 1f7cA | 0.11 | 0.07 | 0.61 | 0.27 | HHpred | | ---------------------GFSIIKKCIHAVETR------GINEQGLYRIVGVNSRVQKLLSILMDPETEICAEWEIKTITSALKTYLRM--------------- |
10 | 5u1dA | 0.11 | 0.10 | 0.97 | 0.22 | MRFsearch | | --DTFTRNLTLMSILTIASAVLEFVGDGIYNNTMGHVGEVFGAVLETEFFQQMSRVTEDTSTLSDSLSENLSLFL-WYLVRGLCLLGIMLWVSLTMVTLITLPLLFL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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