Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MADCDLCGVSIPTVCPVKVFEPRFEHSYPEGIWKGLCEKCLDSAKGTFDEKSDEEGKCVPGNKFEKCDLCGTTCQLYDVEVFVPSFKNVYDEEVRHLCRRCLESCNEAYDRKDE |
1 | 5zi6A | 0.12 | 0.05 | 0.46 | 0.65 | DisCoVER | | KHDCVIC---FENEVIAALVPCGH--------N-LFCMECANKICETPS-------------------CPVCQTAVTQAIQ-IH------------------------------ |
2 | 3oc2A | 0.04 | 0.04 | 0.87 | 0.83 | DEthreader | | GSLVIMDGEI-LAMTAPGTVKPFVMQLGGNLSVTAIQLAHAYAALANDAS-QG---------VEAQGVFRAQVHAAG-KSGTARK--AYREF-GGVSAPVFSKVMAGALRLMNV |
3 | 4uj3B | 0.08 | 0.08 | 0.95 | 0.49 | CEthreader | | LYNEFRLWKDEPTMDRTCPFLDKIYQEDIFPCLTFSKSELASAVLEAVENEPVGKASAVECGGPKKCALTGQSKSCK-HRIKLGDSS-----NYYYISPFCRYRITSVCNFFTY |
4 | 2v64A | 0.09 | 0.09 | 0.95 | 0.58 | EigenThreader | | HHHGSALQLSREQGITGINSILYQRGIYPSETFTQKYGLTLLVTTDLELIKYLNNVVEQLKDWLYK------CSVQKLVVVISNIESGEVLERWQFDIECTAKDDKAIQDEIRS |
5 | 4u7pA1 | 0.18 | 0.12 | 0.67 | 0.35 | HHpred | | -DICISCGSLN-----VTLEHPLFV--------GGMCQNCKNCFLECAYQYDDD-------GYQSYCTICCGGREVLMCGN--NNCCR-------CFCVECVDLLV-------- |
6 | 2jm1A | 0.12 | 0.11 | 0.86 | 0.53 | MRFsearch | | --SCTACGQQVNHFQKDS----IYRHP---SLQVLICKNCFKYYMSDDISR-------DSDGMDEQCRWCAEGGNLICCDWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKK |
7 | 2jm1A | 0.12 | 0.11 | 0.94 | 0.41 | FFAS-3D | | IVSCTACGQQV----NHFQKDSIYRHPSLQVL---ICKNCFKYYMSDDISRDSDGMDCAEGGNLICCDFCHNAFCKKCILRYCYICHPEPLLDLVTACNSVFENLEQLLQQNKK |
8 | 3uebA | 0.12 | 0.11 | 0.84 | 1.03 | SPARKS-K | | -------GSSGKRVIHIGL--PELS----EEQLIEIGELAQETIIDYVFDHLTRSKDIEVTMRIN-----REETLDLEIEVYLEVPIFVVDKLIDEAVERAYEIVERKLREIAN |
9 | 1qo5A | 0.11 | 0.06 | 0.54 | 0.50 | CNFpred | | -------------------------------------SLAIQENANALARY---------------ASICQQNGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALNDHHV |
10 | 4j1qA | 0.08 | 0.06 | 0.76 | 0.83 | DEthreader | | RYLFAGV-SGFKT-------YLITGG--------------AGSLGLLFAKEIANRGSTINGIIH--PKVSGLHVDFIFFSSVS--L-NAGQADYAAANSFMDAFAEYRRSLAAS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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