>PF10620 (200 residues) RHALVWLRADAPSQALTPGAQPRLQAWFAAGFPAVVARRDGAEQPGQVRLGVPLPPAQGK QRIALCAQVSDIARSVPALALPEVISHAPPQWQAALHALQAQATAIGMQPRVFGSFAFQA VTGLPYVHAASDVDLLWTLDTPTQAHALVTLLQQWEHVTARRADGELLLPDGNAVNWREY AGDAQQVLVKRNDGCRLLPR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RHALVWLRADAPSQALTPGAQPRLQAWFAAGFPAVVARRDGAEQPGQVRLGVPLPPAQGKQRIALCAQVSDIARSVPALALPEVISHAPPQWQAALHALQAQATAIGMQPRVFGSFAFQAVTGLPYVHAASDVDLLWTLDTPTQAHALVTLLQQWEHVTARRADGELLLPDGNAVNWREYAGDAQQVLVKRNDGCRLLPR | |||||||||||||||||||
1 | 4cs6A1 | 0.19 | 0.10 | 0.53 | 0.88 | DisCoVER | -----------------------------------------------------------------------------LS----I----PPSIQCQTEAACRLITRVTRAIHLYGSAV---AG---GLKPNSDIDLLVTIQPLAQRATLMQELLALSSEK-RALEVTVVLYPPSREMQFGEIQGY-EPAQQDWDMVLLI-- | |||||||||||||
2 | 3o24A | 0.10 | 0.08 | 0.77 | 0.83 | DEthreader | ------WWSTALLSLYRHLV-------FLIRIGVDPVTADSGT----FNRPYLAARLPGV-------------WKSQYPTLVNAIRKDEGRFETQLANLQRYIERRRFFPHFLST--DL-----VEPGKSRVKFYASERHVNQMVEDIWTFRALFDSQSPFPDPQMYVCVFGAYVSFAY--GGAYVTLYN---HSF---- | |||||||||||||
3 | 4cs6A1 | 0.15 | 0.09 | 0.56 | 0.56 | CEthreader | ---------------------------------------------------------------------------------LSIPPSIQCQTEAACRLITRVTGDTLRAIHLYGSAVAGGL------KPNSDIDLLVTIQTEAQRATLMQELLALSSAEKRALEVTVVLYSPPSREMQFGEWLREDICQGIYEPAQQDWD | |||||||||||||
4 | 6v4uC1 | 0.07 | 0.04 | 0.62 | 0.57 | EigenThreader | --------TELLV---LKAHH----------DIVRLVQLDD-----YRFASAGD-----DGIVVVWNAQTGEKLLLNTAII--------------------------TFPLTASA----------DRTFQSTVKCLTVLQRLDVVWNRKLDS--------DTGISALEIPKNCVVAAVGKELIIFRLVAPTEGSLEWDIL | |||||||||||||
5 | 5uvdA1 | 0.13 | 0.07 | 0.54 | 0.52 | HHpred | --------------------------------------------------------------------------------------LSSDELKTVVSVLAQKLDSLNIDYAIMGGAATCL-LSGDPNRRTEDVDLVIHVDHRITADNLTTQLLKSPSQFGHLVELEVFDYQPQRPQYDLQTATRTTL---NINGQKVK-- | |||||||||||||
6 | 4cs6A1 | 0.22 | 0.10 | 0.45 | 0.35 | MRFsearch | ----------------------------------------------------------------------------------------PPSIQCQTEAACRLITRVTRAIHLYGSAVAG------GLKPNSDIDLLVTIQTEAQRATLMQELLALSSPPKRALEVTVVLYSSREMQFGEWLRE----------------- | |||||||||||||
7 | 1wotA | 0.25 | 0.12 | 0.46 | 0.63 | FFAS-3D | -----------------------------------------------------------------------------------------ETLRARREAVLSLCARHGAVVRVFGSV----ARGEA--REDSDLDLLVAFEEGRTLLDHARLKLALEGLLGVRVD--IVSERGLAPRLREQVLREAIPL------------ | |||||||||||||
8 | 6wvsA | 0.15 | 0.11 | 0.72 | 0.59 | SPARKS-K | --DILIVNAT------DVDELKQVEILRRLGAQIAVVSDDALKKGGDI----------------LIVNATD-----------------VDEMLKQVEILRRL----GAKQIAVVSILQEALKK------GGDI-LIVNATDVDEMLKQVEILRRLQEALKKGGDILIVNATDV----DEMLLGAKQIAVVSDDWRILQEA | |||||||||||||
9 | 3l49A | 0.13 | 0.11 | 0.87 | 0.64 | CNFpred | PDAIIEQLGN--LDVLN----PWLQKINDAGIPLFTVDTAT--PHAINNTTSNNYS-GGKGNVLVFNGFYSVPVCKRYDQMKYVLE-IPNTIQSAYSNVTDMLTKYDVGAIWADVPMIGATQALQ----RTDIRTYGVDG----SPEFVEMVADP----ESPAGAVAAQQPIGKLAVQNVARVKPFTFAP----AVLITK | |||||||||||||
10 | 4yl7A | 0.12 | 0.09 | 0.78 | 0.83 | DEthreader | -DVDNGTV----ATHLDVVLRRLWGRWGN----SYVAVD------GSPFETVELLSHPGA------------DRCWLDPAPSVLDEAMRLGVRAAWQGLRGWLDEHGSGRISLALD---------LADTDARVKVYVQHLDWADIDRQAAVARGFHGVGVPTAATLYIPMPNFVAY--RPAAPGRPRFACYVAP------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |