>PF10595 (372 residues) FKLTKPEPYQFDEREKERKQKKTIRQKKVEEMIEEAREKERKEYNTRPKPKEIPDHVKKP LYEKIMHEQEKRRQEVRKNSVAITIQREKPFKFYIRDKNPETSLKRSKRKTQEERDSFVF KANKVPWFCSINLLEKINRDEELKRQERVAKQAQKTMSMSKLPPRMEKHEQERRARELME GYSGVTKVSTMNPLKREMYVEPSFQPPKAKPIPNFNKMHQDFQERLDKKRRGKRPTEVLP FNFQESRKLPPRDYLDQENELMRLTKTKPAVDKLQEAMKWRDHKPKYQPPSIQKWETLVE KNKKDKEEKEKKKQEEKKKEEERKKKAEEMAVIVREKYSKNDQTLKLQQNRKEAVTRKQQ EFKKQEQEWQQK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FKLTKPEPYQFDEREKERKQKKTIRQKKVEEMIEEAREKERKEYNTRPKPKEIPDHVKKPLYEKIMHEQEKRRQEVRKNSVAITIQREKPFKFYIRDKNPETSLKRSKRKTQEERDSFVFKANKVPWFCSINLLEKINRDEELKRQERVAKQAQKTMSMSKLPPRMEKHEQERRARELMEGYSGVTKVSTMNPLKREMYVEPSFQPPKAKPIPNFNKMHQDFQERLDKKRRGKRPTEVLPFNFQESRKLPPRDYLDQENELMRLTKTKPAVDKLQEAMKWRDHKPKYQPPSIQKWETLVEKNKKDKEEKEKKKQEEKKKEEERKKKAEEMAVIVREKYSKNDQTLKLQQNRKEAVTRKQQEFKKQEQEWQQK | |||||||||||||||||||
1 | 5ncog | 0.09 | 0.08 | 0.91 | 1.00 | FFAS-3D | FRIFIPIP--GIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPISASIIIQLLAEIKKEGESGRRKISQYTRYGTLV----LAIFQS--------IGIATGLPNMPGMQGLVINP-------GFAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVVFVERGQRRIV------VNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSEQTAKYIDKVMTRLTYFGGTSLLIVVVVIMDFMAQVQTLMMSSQ----- | |||||||||||||
2 | 6yvuA | 0.09 | 0.09 | 0.99 | 1.24 | SPARKS-K | EKELHKSKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKYANTEKDYKMVQEQLSKQRDLYKRKEELVSTDGGYNAQLAKAKTELNEVSLAIKKSSMKELLKKLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFDPSRIKDLKQREDKLKSHYYQTCKNSEYLKRRVTNLEFNYTKPYPNFEAVGQLGRLFSQTATQLLERGRLKRVTIIPLDKIYTRPISS-----QVLDLAKKIAPGKVELEDPETAKKITFHPKIRARESLLVDIQKYNQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDARNEEILRDIGECENEIKTK | |||||||||||||
3 | 6flnA | 0.05 | 0.02 | 0.41 | 0.75 | DisCoVER | LYYIKVILDYNTAH-------------------------N--KVALSYTVASVAECSQVLGL--HC------YKKGI--HY-------WEVELQ-----------------KN---NFCGVGI--CYGSMNRQGPES--------------RL--GRNSASWCVEWFNT------------------KISAWHEKTLP---STKATRVG---VLL------------------NCGFVIFFAVAKVHLMY-------------------------KFR---VDFEALYP-A--FW--VF--SA---------------------------------ATLSICS----------------------------- | |||||||||||||
4 | 4c2tA | 0.06 | 0.04 | 0.63 | 0.67 | DEthreader | --A-TFTF---IRGIIDRKAYYEKKAIDLTETVRFQELTRALLVVGDPDQSIY--RGA--------------VLEAANKLIENNTERL-----------YRTN-AQSRVI---V--DRREIRDIL-----------------------AY-ARLALNPADDALRRIIGRPRRGIG-------AAEILDRGAHKATEFAGLMAMSAADNYE-------------YLDLLRRLELEESAAEEW----------------------------------D-EAN-VGGSIADFLDDAALLSSDMR-TK--EDAVTLEFPVVFI-VGVEQGLLPSAIA-GPSGIE------------AFLEDIEGLF-DTVDPYGQP | |||||||||||||
5 | 6bpqA | 0.06 | 0.06 | 1.00 | 0.52 | CEthreader | TNDRNWESADLQDVMFTALVKDRPKFVRLFLENGLNLRKFLTTEVLRELYTNNFSSLVFKNLQIAKNSYNDALLTFVWKMVEDFRRGRHPLQFIWSVLQNKKELSKVIWEQTRGCTLAALGASKLLKSMAKVKNDINAAGESEELANEYETRAVELFTECYS-NDEDLAEQLLTYSCEAWGGSNCLELAVEARDQQFIAQPGVQNFLSKQWYGEISRDTKNWKIILCLFFFPLIGCGFISFRKKKLFLYYVSFFTSPFVVFSWNVIFYIAFLLLFAYVLLMDFQKEPTALEIILYVLVFILLCDEVRQWYMNGSKYFSDLWNVMDTLAIFYFIAGIVFRLHSSSWYSGRVIFCLDYIVFTLRLIHIFTVSRN | |||||||||||||
6 | 6traA | 0.05 | 0.05 | 0.93 | 0.75 | EigenThreader | FDRTLARGPQTTTWIWNLHALAHDHFGHLAVVFIWLSGMYFHGAKQVVWPIVGQGILNSGLFQLWRA--------------------SGITNEFQLYCTAIGGLVMAGLMLFAGWFHYHK-----RLEWFQNVESMLNHHLAGLLGLGSLAWAGHQIHVSLPINKLLDAGFILNPSLMAELYPKVDWGFFSGVIPFFTFNTFNGGLNPVTGGLWLSDTAHHHLAIAVLFIIAGHMYRTNYAMPPYPYLATDVGGAAHGAIFMVRDYDPAMNQNNVLDRVLRHRDAIISHLNWVCIFLGFHSFGLYVHNDTMRAFGADFMVHHIHAFTIHVTVLILLKGVLFARGWDHVFLGLFWMYNCISVVIFHFSWKMQS | |||||||||||||
7 | 6gmhQ | 0.13 | 0.10 | 0.79 | 0.31 | HHpred | ---------------------------------------SLDRAKAEAEHDEHYVTTSYRLYEAMCEFHE-----AEKLYKNILRE--HPNYVMARDKGYEASFKEALQKQEWGPGQKKFERQPTQSDTYSMLWHQPTRDRE--KEKRHQDRALAIYKQVNDAKNLYAANGIGAVLAHKGYFREA--------RD-------VFA-QVREATADYISAVQMYENCLRKFYKHQNTEVCKQTLLKARHVPSDTVLMNVLQRVLKDEKSN--LKEVLLAHRYFSYLSK-LALATEARQDLLSQAQYHVARARKEERELRKQEQEKELKLLKEQEEKRL----------REKEEQKKLLEQRAQYVEKTKNILM- | |||||||||||||
8 | 6v92R | 0.12 | 0.08 | 0.72 | 0.68 | MRFsearch | ---TIPKPR---------------SSAQLEQLLYRYRAIQNHPKE------------NKLEIKAIEDTFRNISRDQDIYETKLDTLRKSIDKGFQYDEDLLNKHLVALQLLEKD--------TDVPDYFLDLKTALGDPDTEIRISARISNRINELERLDDLSSRMDTFKIKALVELKSL---------------------------------KLLTKQKSIRQKLINNVASIPYLRDSPFTA------------AAQRSVQIRSKV-------------------IVPQTVRLAEELERQQLEKRKKERNLHLQKINSIIDFIKERQSEQWSRQERCFQFGGASLHNQMEKDEQKRIERTAKQRLAALK-- | |||||||||||||
9 | 2tmaA | 0.10 | 0.07 | 0.70 | 1.00 | FFAS-3D | ------QMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKK--------------LKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQER---------------LATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAE------------------------------DADRKYEEVARKLVIIE---------------------SDLERAEERAELSE------------------------GKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKA- | |||||||||||||
10 | 6thkA | 0.10 | 0.08 | 0.81 | 1.22 | SPARKS-K | -----GDLIQREIYLQKNRSIFEQGTKEKKEINKKVSDQVDGLLKQKREAT--------------RQERVDVMSAVLHKMESDLEGYKKPFIDYEKQSIYEAWVKIWEKNSWEERKKYPF---------QQLVRDELERAVAYYKQDSLSEAVKVLRQELNKQKALKEKEDLSQLERDYRTRKAN--------------------------------LQMKVQSELDQAGSALP---------PLVSPTPEQWLELVTQAIADKKQLQTTNNTKNSPTPLEKQKAIYNGELLVDEIASLQARLVKLNAETTRRRTEAERKAAEEQALQDAIKFTADFYKEVTEARQLAEGAAEAIKSFEKHKDALNKKLSLK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |