Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | TEMNLCNIHFHKNAEHKGGEFTLYAGNGDGEGYHTGYRYSGKLSDAELAPVKNKVCPSKHGDLKPGDTIEVHYVHSTAQVEPGPTLGACLSDANKNPQLRVETQVYVLVNDKNAYDFEELTEHEVQDGVHQAVAIPTNTGKPIQYMGSTTGPGYNEKGSPFQVTWSVRPKVAKVNIES |
1 | 6qqmA | 0.19 | 0.12 | 0.61 | 0.83 | DEthreader | | NTIIQMHFHWGDRSEHT---IDG-------------FR----------------------------FPLEGHIVSFRRSP----------SEAIRPGGLAVLGIMHQIVESIKQTAFKAYNDDI------NLALLLSLLPRYFRYLGSLT--------T-ENVLWTVFIDPVLITREQ |
2 | 3jxfB | 0.17 | 0.11 | 0.62 | 0.83 | DEthreader | | DYASKITFHWGDGSEHSLE--GQ-------------K-----------------------------FPLEMQIYCFDASS--------FEEAVKGKGKLRALSILFEVGTEE-NLDFKAIFIL--------LNLLPNSTDKYYIYNGSLT----PP-CT-DTVDWIVFKDTVSISESQ |
3 | 3fe4B | 0.25 | 0.17 | 0.71 | 0.49 | HHpred | | -VYIAQQMHFHWGGEISGSEHTV-----D------GIRHV----------------------------IEIHIVHYNSKY---KSYDIAQDAPD---GLAVLAAFVEVKNYPENTYYSNFISIKYLTGLDVQDMLPRNLQHYYTYHGSLTTPPCTEN-----VHWFVLADFVKLSRT- |
4 | 3jxgC | 0.10 | 0.08 | 0.84 | 0.70 | DisCoVER | | DNESSN----KTWMKNTGKTVAILLYFVSGAFKAEKVEFHW-----GHSNGSAGSEHSVNGRRFPV---EMQIFFYNPDDFD--SFQTAI---SENRIIGAMAIFFQVSPRD--NS---ALDPIIFLDPFILRDLLPSLGSYYRYTGSLTT-----PPCSEIVEWIVFRRPVPISYN- |
5 | 3fe4B | 0.23 | 0.16 | 0.70 | 0.57 | MRFsearch | | --YIAQQMHFHWGGEISGSEHTV-----------------------------------------IRHVIEIHIVHYNS---KYKSYDIAQDA---PDGLAVLAAFVEVKNYPENTYYSNFISHTTLTGLDVQDMLPRNLQHYYTYHGSLTTPPCT-----ENVHWFVLADFVKLSRTQ |
6 | 1jczA | 0.21 | 0.15 | 0.69 | 0.90 | SPARKS-K | | SRYSATQLHLHHGSEHT----------VSGQHFA----------------------------------AELHIVHYNSDLYPD--ASTASNKSE---GLAVLAVLIEMG--SFNPSYDKIFSHVKYKGQNIEELLPERTAEYYRYRGSLTTPP----CNPT-VLWTVFRNPVQISQEQ |
7 | 3jxfB | 0.11 | 0.10 | 0.92 | 0.68 | MAPalign | | -SPKQSPINIDELTQVNVNLKKLKFQGWNLTNDYRVSGGVSEMVFKASKITFHWGKCNMSSDGHSLEFPEMQIYCFDADR--FSSFEEAVK---GKGKLRALSILFEVGTEE-NLDFKAIIDGSVSRFGKALDFLL--PNKYYIYNGSLTS-----PPCTDTVDWIVFKDTVSISESQ |
8 | 1a42A | 0.15 | 0.14 | 0.92 | 0.74 | CEthreader | | DQATSLRILNNGHAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAA----ELHLVHWN------TKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADGLLPESLDYWTYPGSLTTP-----PLLECVTWIVLKEPISVSSEQ |
9 | 4es8A1 | 0.13 | 0.13 | 0.96 | 0.52 | MUSTER | | LPDDLMNF-WEVSADGSSGRFFSKGATDAKDVKKPGWREHNEVKDSYIKIDKQSIAARYKTSTTAP--YSVAFKVNTKSLIKDHDYKITFEQGQIASGITVDYRIGSAFNKTTDDSFKISDESKYIEGEEQGFKQREQGDKTISFRTLKEGPKVEKKPGDLDVEFK---NLKIIDVT- |
10 | 3iaiA | 0.18 | 0.17 | 0.92 | 1.25 | HHsearch | | RFQSPVDIRPQLAAFSPARGFQLPLPENNGHSVQPGLEMALGPGRERALQLHLHWGGSEH--TVEGFPAEIHVVHLSTAF---ARVDEALGR---PGGLAVLAAFLEEGPEEN-SAYEQLLSRLEVPGLDISALLPSDFSRYFQYEGSLTTPP----CAQ-GVIWTVFNQTVMLSAKQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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