Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GAVIFGCKNHTFTECVKKMLFGLPAGHSSYVKNISPGLTLFLFNYSDRKLHGIFEATSCGKMNIDPRAWITNEGSEYTPYAAQVQVAVRRQCQPLHEEEFKPIIAKNYYSEGHFWFELDREQTRRLTELF |
1 | 2hd9A | 0.17 | 0.17 | 0.97 | 1.33 | DEthreader | | TYWICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVREEPKIVGIYEVTSEPYV-DFSRIFKPHRGG-KETYPYRVKIKPI-KIGEINFKPLINDL-KFIKNKRMHFRELPEEDYKLIEKLL |
2 | 2hd9A | 0.17 | 0.16 | 0.95 | 1.33 | DEthreader | | TYWICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVREEPKIVGIYEVTSEPYVDF-SRIFKP---GGKETYPYRVKIKPI-KIGEINFKPLINDL-KFIKNKRMHFRELPEEDYKLIEKLL |
3 | 2p5dA | 0.10 | 0.10 | 0.97 | 0.93 | HHpred | | AYWLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQRSYIRGVYEVVSEVYKDSSK-IFKPTPRNPNEKFPYRVKLKEIKVFPPINFKELIPKLK--FITNSGMMREIPEEDYKLIVGN- |
4 | 2p5dA | 0.10 | 0.09 | 0.96 | 1.35 | DisCoVER | | AYWLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIRPPYIRGVYEVVSEVYKDSS-KIFKPTPRNPNEKFPYRVKLKEIKVFPINFKELIPKLK--FISGMGKAMREIPEEDYKLIVG-- |
5 | 2p5dA | 0.11 | 0.11 | 0.97 | 1.07 | MRFsearch | | --WLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQPPYIRGVYEVVSEVYKD-SSKIFKPTPRNPNEKFPYRVKLKEIKVFEPINFKELIPKLKFIWSGMGKAMREIPEEDYKLIVGN- |
6 | 2p5dA | 0.12 | 0.12 | 0.98 | 1.47 | SPARKS-K | | AYWLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQPPYIRGVYEVVSEVYKD-SSKIFKPTPRNPNEKFPYRVKLKEIKVFPPINFKELIPKLKKRWSGMGKAMREIPEEDYKLIVGN- |
7 | 2hd9A | 0.18 | 0.18 | 0.97 | 1.26 | MAPalign | | TYWICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRLEPKIVGIYEVTSEPYVDF-SRIFKPHRGGKET-YPYRVKIKPIK-IGEINFKPLINDL-KFIKNKKRWHRELPEEDYKLIEKLL |
8 | 2p5dA | 0.10 | 0.10 | 0.98 | 1.23 | CEthreader | | AYWLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIKPPYIRGVYEVVSEVYKD-SSKIFKPTPRNPNEKFPYRVKLKEIKVFPPINFKELIPKLKFITNKKRWSGREIPEEDYKLIVGN- |
9 | 2p5dA | 0.12 | 0.12 | 0.96 | 1.12 | MUSTER | | AYWLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQPPYIRGVYEVVSEVYKDSSKI-FKPTPRNPNEKFPYRVKLKEIKVFPPIN---FKELIPKLKFITNKKRWEIPEEDYKLIVGN- |
10 | 2p5dA | 0.12 | 0.12 | 0.98 | 1.35 | HHsearch | | AYWLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQRSYIRGVYEVVSEVYKDSSK-IFKPTPRNPNEKFPYRVKLKEIKVFPPINFKELIPKLKNKRWSGGKAMREIPEEDYKLIVGN- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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