>PF10472 (410 residues) MEPGTGGSRKRLGPRAGFRFWPPFFPRRSQAGSSKFPTPLGPENSGNPTLLSSAQPETRV SYWTKLLSQLLAPLPGLLQKVLIWSQLFGGMFPTRWLDFAGVYSALRALKGREKPAAPTA QKSLSSLQLDSSDPSVTSPLDWLEEGIHWQYSPPDLKLELKAKGSALDPAAQAFLLEQQL WGVELLPSSLQSRLYSNRELGSSPSGPLNIQRIDNFSVVSYLLNPSYLDCFPRLEVSYQN SDGNSEVVGFQTLTPESSCLREDHCHPQPLSAELIPASWQGCPPLSTEGLPEIHHLRMKR LEFLQQASKGQDLPTPDQDNGYHSLEEEHSLLRMDPKHCRDNPTQFVPAAGDIPGNTQES TEEKIELLTTEVPLALEEESPSEGCPSSEIPMEKEPGEGRISVVDYSYLE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MEPGTGGSRKRLGPRAGFRFWPPFFPRRSQAGSSKFPTPLGPENSGNPTLLSSAQPETRVSYWTKLLSQLLAPLPGLLQKVLIWSQLFGGMFPTRWLDFAGVYSALRALKGREKPAAPTAQKSLSSLQLDSSDPSVTSPLDWLEEGIHWQYSPPDLKLELKAKGSALDPAAQAFLLEQQLWGVELLPSSLQSRLYSNRELGSSPSGPLNIQRIDNFSVVSYLLNPSYLDCFPRLEVSYQNSDGNSEVVGFQTLTPESSCLREDHCHPQPLSAELIPASWQGCPPLSTEGLPEIHHLRMKRLEFLQQASKGQDLPTPDQDNGYHSLEEEHSLLRMDPKHCRDNPTQFVPAAGDIPGNTQESTEEKIELLTTEVPLALEEESPSEGCPSSEIPMEKEPGEGRISVVDYSYLE | |||||||||||||||||||
1 | 6jt5A | 0.05 | 0.04 | 0.74 | 0.68 | DisCoVER | PRYQMNVRVAPVLGG---LTM-PRGITLLLVVERGRGLTGHTLD-TSSKVVIQDTQINHGIDV-----------------HPSGRRIIASSGDIAWSWDY---DPATM------TATNRRTLVTGMNNHFTRTVHISALNVGSRAQIRVFDLPQNGVPFVSQYGRVLG-YGLRND--VGITENIHSI--EN--SLDN--AY---RMVRRDIHTNNPAEKVYNLGDPSIFGGYPDCYTVWEPSDFKQPGDWFTQDNSGYTDCNAVKPTLLLP--PH------------------------------------------------------TAPLDMKFGTNLYVALHGSPQGYKVVVVPGAWSDLL-TNRNENQCSGFGNA----NCFRPVGLVWSANLYVSSDTEVFII- | |||||||||||||
2 | 5jouA | 0.07 | 0.04 | 0.67 | 0.67 | DEthreader | ---T-TPIEVE------FQYNTKVSVPDSYSFCRNDYYENLKTIENLP-----FILY-----------------------------AGYV---VPERWRTAWNPN------DGGQSYCG-----------------------RE-KYNT---MLGALKGLHFDKARFPDPK-MV--HARMMISVWP--KFYVTTEHFKEFDENGWMYDDARKWKYYAWWMDASEPNVFNAYALMAEYGQRGDNNKRVFLLT-S-------GLQRYSTATWYWTMDIGGFCVENVQKQWNYKEWRELNTRWYQFGAFVP-----QSVVYY--TKLRYNMMILTIMRPLVMDFT-----------VNDIGDQSPIYFWPLYVRAIIPFLIY-ADGEFT------------------------ | |||||||||||||
3 | 1vt4I3 | 0.07 | 0.07 | 0.97 | 0.66 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 4kvmA | 0.09 | 0.08 | 0.90 | 0.75 | EigenThreader | IEPLLERHPEHGESLAIKGILLHSLGNTKEGYDNVRLGLR-------------NDVGSGVCWHIFGLISRADKDYVQAAKCYINAHKLEKNNSSLLRDLALLQSQLNALLQDNPGVRANWSALAVAQFLRGEYASAYKIVDAFESTINQGVPVDAMLFMNLVILKKDGVEDAYKHLLSIEKKVLDRVAFLETRAEYELYLSKMEEAKSTIYLLLDRN-----------------------PDNHQYYYN----LQRAYGYEDASGKVLSLSTTNKFS---EDDDNSQIEIPTTLLWTYYFLAQHFDHVGELEKAEKYVDLAPTLVELFMTKARISKHKGELQTAMEIMDHARKLDLQDRFINGKCAKYMLRNDELADMQCLWYMLEDGKSFARQKKFALALKRFSTVFKI | |||||||||||||
5 | 3zxaC1 | 0.18 | 0.06 | 0.35 | 0.31 | HHpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSTARDGITRSGSELITTLKKNTD----TEPKYTTAVLNPSEPGTFNQLIAQYEKYRFTSLRFRYSPMSPSTVAFDRDAAKPPPNDASLSSVPWTGFI----------LTVPTDS------------------TDRFVADG------ISDPKLV--DFGKLIMATYGQGAQLGEVVEYTVQLK------------------------------------------ | |||||||||||||
6 | 3iw0A | 0.12 | 0.05 | 0.41 | 0.42 | MRFsearch | -----------------------VFSSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFDELQERAQKIAAEAAAAGSGDFVEQVSCELPLQAIAGLLGV------------------------------------PQEDRGKLFHWSNEMTGNEDPEYAHID-----------------------------------------------------------------------------------------------------------------PKASSAELIGYAMKMAEEKAKNPA------------DDIVTQLIQADID-------------------GEKLSDDEFGFFVVMLA------------------------------------- | |||||||||||||
7 | 3cnfB | 0.13 | 0.12 | 0.91 | 0.59 | FFAS-3D | ---------------------VPLAGANTIIAIMRLFTPQGFLRTDDLAIAANPRASRNPQTYIPYTNQRGTVTNEFASRFRTIVATLANVVNERAVQDDMQKATLRHLETQFDNIASVVYATMSNFMLNGVINGPASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNRYHEEIADIFDQADFIQTSDAVRQLRALMPTLSTSQIRHA-----IERIAQITDVDSTDYGKLTLRFLGTLTRSLKMQNIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELQLRRLSVGLRLITNPRIARRNGVRIMYLTDDDPDPDVPEGYVAVQYAHRLFSSSLANKRNRVTYTHPPTGAYPSPTGRP----------HVHMTINERAGMSKLVADNIIASVIKSNWVVDILDIEYT- | |||||||||||||
8 | 5voxO | 0.12 | 0.10 | 0.87 | 0.86 | SPARKS-K | --------MATALYTAND-FILISLPQNAQPVTAPGSKTDETLIGGRAFVSDFKIPEFKIGS---------------LDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANNSAKTNLAAAERKKT--------GDL-----SVRSLHDIVKEDFVLNSEHLTTVLVAVPKSLKSDFEKSYELSKNVVPASASVYVLFNVHLFKKNV-------QEFTTAAREKKF-----IPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVGLPPHFN---IKIIAVPPKNLSKCKSELIDAFGFFMKDKKGKINKQDTSLHQASLVDTEYEPFVMYIINL | |||||||||||||
9 | 5gmkZ | 0.12 | 0.03 | 0.25 | 0.56 | CNFpred | ------------------------------------------------------------PALSALIALLNSDIPDIGETLAKLMLMFVQQFYVSCGNILQCLSILFLYD---------------------------IHEIVILQILLLLLEKNSLRLVIAV-----MKICGWKLALVSKKTHDMIWEKLRYIL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 2vdcA | 0.05 | 0.04 | 0.76 | 0.67 | DEthreader | VGFIAAPRRSVVEKGIEALKAVW-HRGAVLAEQLTPDLLDERF-E--SDF-AIY---W-LAQPFRLAHNGEINTVKGNVNWMKAHETR----------I--DSGSLDT-FE--VRAGRTMVMLVPDGDRNGLRPMRLGPGEM-IAVDLQ---------KL-YRDRELKDLAWDVRRVMSLKTRESPVL----------ATFALIAAAIPA-------TAEGYLIGVGATTVNAYLQEAAER-RR-----------AIGLSVVSRISGI-DRHGWEGGVIHTLQATNDSYTTFKKYSEQVNK--PM-QL---RD-LELRSPV-SIIRKRFITPGKSDGQIKVTVADIILRLREEF-----GRNEVP-DTLDARIADAYNAR-NTQ--------------------TAGQSN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |