>PF10463 (219 residues) IQFTQRSLEQLWLFGFAGLYALHSLSGIIFFVKCKGLKLDLEEIDGVPKQKEENERFSKI IETIKGLNSAESEYDFNWPAGLPKPEDGKPKDTEQAAVFDLVLMATAYVFLHELKHVIFE SEGNSPEDRLREELECDSFALEMMLSKIQDYSAKSGYPEGQVLMKRSISIALGSVFLAVA TPRHNLGGTTTHPAVHDRWSATLGKIELEENDFYWLYFA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | IQFTQRSLEQLWLFGFAGLYALHSLSGIIFFVKCKGLKLDLEEIDGVPKQKEENERFSKIIETIKGLNSAESEYDFNWPAGLPKPEDGKPKDTEQAAVFDLVLMATAYVFLHELKHVIFESEGNSPEDRLREELECDSFALEMMLSKIQDYSAKSGYPEGQVLMKRSISIALGSVFLAVATPRHNLGGTTTHPAVHDRWSATLGKIELEENDFYWLYFA | |||||||||||||||||||
1 | 6sarA1 | 0.12 | 0.09 | 0.71 | 0.93 | DisCoVER | EMQMGDYYVRQLPL-INLLTQYINSLGMRLVSHANSVKTPF-HFF-------L---I--NN-DEI--NAFAFF--G-GN--VVLH--------SALFRYSDNESQLASVMAHEISHVTQRH---SF--TQQNEQEADRIGIQVLQ-----------R---S--GFDPQAMPTFLEKLLDPEILL------THPLPESRLADARNRANM--RPMV----- | |||||||||||||
2 | 5xf9D | 0.05 | 0.05 | 0.90 | 0.83 | DEthreader | KTLEKMRRLMHYGQVLQSHALFFYLAAPDLLLGF-SADQRNVFGLAARARGILVRQGQEIEKRIHGTSAVGIHKNLERLLRAP-IRS-CEAVALIER------SLVLDLY-DGTFRDHYDPN-D-YDQLLVEPYLGFYRVGSARLINCRQRFLTFDTVSTLGYHWARLEEAPRGT-LI------HHYEVI-YCNL-IVSTTHNNAVMQAVAVRADPCSC | |||||||||||||
3 | 1otkA | 0.06 | 0.06 | 0.97 | 0.72 | CEthreader | ----HGNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGLDLLGQARNFLSYAAELAGEGDEDTLAFTRDERQ-FSNLLLVEQPNGNFADTIARQYFIDAWHVALFTRLM-ESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAINKLWRFTAELFDADEIDIALSEEGIAVDWEAEVFAGINEATLNVPQEQAYRTG | |||||||||||||
4 | 1r1hA1 | 0.13 | 0.12 | 0.95 | 0.93 | EigenThreader | TSETAYVNGNMENAVGRLYVEAAFAGESKHVVEDLIAQIREVFIQT--LDDLIVSNDNKLNNEYQSKQLKKLREKVDKDEWISGAAVGILQPP----FFSLNYGGIGMVIGHEITHGFDDNGRNFNKQYGNGENIADNGGLGQAYRAYQNYIKKNGEEKLLHKQLFFLNFAQVWCEYAVNSIKTD-----VHSPGNFRIIGTLQNFHCRKNSYMNPEKK | |||||||||||||
5 | 6sarA1 | 0.16 | 0.12 | 0.72 | 0.86 | HHpred | ------------QMGDYYVRQLR---------GSA--PL-----INDPL------LTQYINSLGMRLVSHASV-KTPFHFNNDEINAFAFGGNLHSALFRYNESQLASVMAHEISHVTQRH-----SFTQQNEQEADRIGIQVLQ--------RSGFDPQAMPTEKLLDQ-------ARYSS-RPPEILLTHPLPESRLADARNRANQMRPMVV----- | |||||||||||||
6 | 4aw6A | 0.11 | 0.10 | 0.89 | 0.57 | MRFsearch | ---AEKRIFGAVLLFSWTVYLWETFLAQRQRRIYKTVPPELGQISETFEKSRLYQLDKSTFSFWSGLYSET------------------EYEITQSLVFLLLATLFSALAGLLYNTFVIEEKLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPL-TKVYVVE- | |||||||||||||
7 | 6sarA1 | 0.13 | 0.09 | 0.73 | 0.92 | FFAS-3D | --LSIGQEMQMGDYYVR----------------------QLRGSAPLINDPLLTQYINSL---GMRLVSHANSVKTPFHFFLINNDEINAFAFFSALFRYSDESQLASVMAHEISHVTQRHS-----FTQQNEQEADRIGIQVLQRS----------------GFDPQAMPTFLEKLLDQARYSSRPPELTHPLPESRLADARNRAN------------ | |||||||||||||
8 | 6w2wA | 0.10 | 0.09 | 0.83 | 0.77 | SPARKS-K | QSTDPNVVAEIVYQLAEVAEIKEILQEALRLAEEQG----------DEELAEAARLALKAARLLEEARQLLSKD---------------PENEAAKECLKAVRAALEAALLALLLLAKH-----PGSQAAQDAVQLATAALRAVEAACQLAKQYPN-SDIAKKCIKAASEAAEEASKAAEEAQRHPDSQ----KARDEIKEASQKAEEVKERCERA--- | |||||||||||||
9 | 6jp4A | 0.08 | 0.05 | 0.70 | 0.69 | CNFpred | --------TDIHKYYGNMSRIAKYNAFMYLMTGK----------------SEYRLRATEALKRA-------------FDGPIYEMDPT-----SGSGVDEIYRAVWAQNFATAYDWIQP----YLSDEDDEIIRERLAKEAQVVYENLYTWGPRP------HNHLSKPAWGLGTLALTLSD----------HPDASKWLNRALEAAN---TNTLYFFNK | |||||||||||||
10 | 5xf9D | 0.05 | 0.05 | 0.89 | 0.83 | DEthreader | TQLEKMRRLMHYGQVLQSHALHFFYAAPDLLLGFSADPAQNVFGLAAREARQGILVRQFGQECIEATATSAIHKNLSERMALLRAPIRSCEAAVALI-----VSLDLYDGTFRHYDP--ND--------YDQLLV-PYL-YRVGARLINCDRQRLTFVAHSLGYHWAREEAPRGT-LI--H---YEVLITYCNL--IVSTTHNNAVMQAVAVRAFDPCL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |