>PF10446 (445 residues) FHEFASDIPREDDWIRQAFSSQGRRITIDDTLQKENAIRKLATEVEEEAEQEEEEMATAL DDDEDLDNLDDGDDVEDEDEDEDEDQEDEDDNSDEDDNSDGYKTDEETGFADSDEEEDED EDLRLWTPGRSTVQNIDSTPIARRPSLPEQLSDSSIASRTSLRARRGRAHRIKIRPGTPE LPDSTDFVCGTLDEDRPMEDAYMSCLAARRREKLQLIPQDIDPSFPASDPEDEGEEEIYN PVHHSSDDEMFFHGKMDDLHHANDRSRRRKKTEHTSPKRFHSPPPLKRRASPAPKARGRS PRRLFDGPSPRRLRSPAPQMLRSPPASPRNGHGAIAFKTLASRPGLTVTKSLPRPPSMFP HMAKGRRVKAPANDIHIRGAIDIVKGLERKRQRRKEKFYQKYCNRARKGQVPERKPQRGL GCERMRELGLLMAGKIDQGNYVLSV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FHEFASDIPREDDWIRQAFSSQGRRITIDDTLQKENAIRKLATEVEEEAEQEEEEMATALDDDEDLDNLDDGDDVEDEDEDEDEDQEDEDDNSDEDDNSDGYKTDEETGFADSDEEEDEDEDLRLWTPGRSTVQNIDSTPIARRPSLPEQLSDSSIASRTSLRARRGRAHRIKIRPGTPELPDSTDFVCGTLDEDRPMEDAYMSCLAARRREKLQLIPQDIDPSFPASDPEDEGEEEIYNPVHHSSDDEMFFHGKMDDLHHANDRSRRRKKTEHTSPKRFHSPPPLKRRASPAPKARGRSPRRLFDGPSPRRLRSPAPQMLRSPPASPRNGHGAIAFKTLASRPGLTVTKSLPRPPSMFPHMAKGRRVKAPANDIHIRGAIDIVKGLERKRQRRKEKFYQKYCNRARKGQVPERKPQRGLGCERMRELGLLMAGKIDQGNYVLSV | |||||||||||||||||||
1 | 3zxaC | 0.04 | 0.02 | 0.56 | 0.83 | DisCoVER | --APVA-------------------LA------Y-------------------------------------------------------------REVSTPRVST-ARDGI------------TRSGSELITTLKKNTD------------------T-------EPKYTT----AVLNPSEPGTFNIAAQYEKYRFTSLRFRYS-------------PMSPSTTGKVALAFDRDAAPPNDLLNIEGCVSSVPWTG--F-------ILTVPTDSTDRFV--ADGISDPKLVDFG-------KLIMATYGQGAA------------------QLGEVRVEYT----VQLKNRTGSTSAQIG--DFAGVKDG----PRLVSWSKFLGTGN-FSL--T--L--FYEKAPVSGLAAGSVQWAGVKVAERGQGVKMVTEQPKGKWQALR- | |||||||||||||
2 | 3ikmD | 0.06 | 0.03 | 0.59 | 0.67 | DEthreader | ------------EQ---DVELRLPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQA--Q---LPPKPYGPEGEAVVAPSAWYSW----------L-----A-----------------------------H-NVSFDRAHIREYLIQG-S---R---MRFLDTMS---------S---------------------CPHVTLAGMLEMGVSYLP--------------ITRRAV-------------PTWLTASN-ARPDRVGSELKAMVD-TREKINYIYWVRELNLPVDRTE-----------------------SLQDLRKVEAWGGESFNKLEIPVEEMTSRVNVVQSADYLSIHDEVRYLVREEDRYRALALITNLTRCMFAYKLGLNDLPQSVAFSALDIYQIELTKGSL------------------------------ | |||||||||||||
3 | 5nrlH | 0.05 | 0.04 | 0.81 | 0.52 | CEthreader | LAEILMVDEIDLENINDFFTPATSELIFARRFLINYSLERSRKRLQKEMERHQKFNTRQELLSRRTELQRMANLELAGSQLVSTKPISAVSLSTDDMVVATGSWAGDLQVPLTQKLDSHVGKIGAIDWHPISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQ-VATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN------------------------------------------------------------------------------------- | |||||||||||||
4 | 6gmhQ | 0.05 | 0.05 | 0.98 | 0.87 | EigenThreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNAKAEAEHDEHYYNAISVTTSYNLARLYEAMCELYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEKFERILKQPSTQSDTYSMLALGNVWLQTLHQDRALAIYKQVLRNDAKN--------LYAANGIGAVLAHKGYFREARDVF | |||||||||||||
5 | 3jb9M | 0.19 | 0.07 | 0.36 | 0.36 | HHpred | ------------------------------------------------------------------------------------------------------------------------------------------NAIARQGHEHGELVQASFRDL------------IPLRARLG---------VGEISLEKPSDEQKQEVANKTKLALQKILSKQIAQSQPKSAVVQQRDDPVYTPSNQMASKQRII--KMVTAEQDPMPPKRHKKV----PRGPPSPPPPVLHSPPRKVSAQE--Q---------QDWQIPPISNWKNP-------KGYT-IPLDKR------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 1jadA | 0.12 | 0.03 | 0.24 | 0.50 | MRFsearch | ------------------------------REKQIAELKALKESSESNIKDIKKKLEAK-----------------------------------------------------------------------------------------------RLDRIQVRSTS-----------------------------DKAAQERLKKEINNSH----------------------------------------------------------------------------------------------------------------------------------------------------------------------IQEVVQTIKLLTEKTARYQQKLEEKQAENLRA---------VAEYEEKLKTLTVEVQEVK--------- | |||||||||||||
7 | 4nl6A | 0.14 | 0.08 | 0.61 | 0.62 | FFAS-3D | ---------------------------------------------------------------------------------------------SSGGSGGGVEQEDSVLFRRGTGQSDDSD---IWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKDKCSAIWSEDGCIYPATIASIDFKRGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDES--------ENSRSPGNKSDNIKPKSAPWNSFLPPPPP---MPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPP------------------IIPPPPPICPSLDDADALGSMLISWYMSGYHTYYMGFRQNQKEGR-------------------------------------------------- | |||||||||||||
8 | 5jcss | 0.08 | 0.07 | 0.93 | 1.56 | SPARKS-K | NVKSIYMNTKFIS---LNKGAHTRVVSVRDLIKLCERLDILFKNNSSVYDSIFSEAADAIGEFKASLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKL----------NIQKKSMN------STLFAFTNHSLRLMEQISVCIQMTEPTTVVQQLAKMLAKKLTVINVSQQT----ETGDLL-GGYTVAVPIQENFETLFNKKNEKFHKMLHRCFNKNQWKNVVKLEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFGSLVKTIRAVNLATAEPDSRSILLSEKGDAEPIKAHPDFRIFACMNPATDVGKRDLPRFTEIYVHSPERDITDLLSIID------KYIGKYSVSDENDIAELYLEAKKLSDNNTIVDGSNQKPHFSIRTLTRTLLYVTDIIHIYGLRRS | |||||||||||||
9 | 5cwoA | 0.13 | 0.05 | 0.42 | 0.38 | CNFpred | --------PELEEWIRRAKEVAKEVEKVAQRAEGNPDLRDSAKELRRAVEEAIEEAKKQG-----------------------------------------------------------NPELVEWVARAAKV--------------------------------AAEVIKVAIQAE-----GNRDLFRAAL----ELVRAVIEAIEEAVKQG----------------------------------NPELVEWVARAAKVAAEVIKVAIQAEKE-------------------------------------------------------------------------------NRDLFRAALE--------------LVRAVIEAIEEAVKQGNPELVERVARLAK------------KAAELIKRAIRAEKE----------- | |||||||||||||
10 | 6rw9A | 0.06 | 0.03 | 0.50 | 0.50 | DEthreader | -------------------------TNTKTLYRWDNNTSQGAPTTWAQLAVLPPRLDLADTLHILLQGLNQQTKQLQNQSAEITTTLADAIAGIQIALERQFFK----TVGVIFHSRLYL-LWIEKQVQTAS-----------------------------------------------------------------------------D--AALLS-AAA------------------------GSKPLLFGTLLLIRRDAEAMSELLQALMSSLM-A----------------------------------STSIGVLMAAAADMAPNVGGSRGKAGAGMSASTKIADNQSWRRQEWEIQKNAESEI--------------------------EIQQAQTQAQLEFLQRKFSNL----------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |