Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ALALYKEYLGDKATDLPASGLLFPLAMRASAKDDKVLVRTLLAVDHDKNSMTFAGDVPKGHLVQLMKANFERLIGGAESAAKAAKPAPSTKTDAHLAVAISCVGRRLVLGQRTEEEVEAVLDVLPKDTKITGFYSYGEISP |
1 | 6pyoA | 0.08 | 0.06 | 0.77 | 0.55 | DisCoVER | | CL-------------VL--DKSGSMALLNGQ-VELGSWVGMVTFDSAAHVQSELIQINLALPAASGGT-S--ICSGLRSAFTVIRKKY----PTDGSEIVLLTDG--ED--N--TISGCFNEVS---GAIIHTVALGLGL- |
2 | 1tndA | 0.02 | 0.01 | 0.87 | 1.00 | DEthreader | | NTLQSILAIVRMILWKIQFDRASLN-------------DSAYYLLELVTY-QDVLRSRVKTTGQ----SAYDMVNRMHESLHLFNSICHRYFASIVLFLNKKDVFSEKIKNTYDAGNYIKVQFLEREIYSHMTCA-TDNVF |
3 | 5awhA | 0.11 | 0.11 | 0.96 | 0.48 | CEthreader | | LNGTPWTVNHDKAINDELVVGMGLAELSGSRTEKRQRFVGITTVFAGDGSYLLGNVSKECEYEGYSDAIRESMTGILRELKKRN------NWRPGDTVRVVFHAHRPLKRVDVASIVFECTREIGSDQNIQMAFVTVSHDH |
4 | 4rckA | 0.12 | 0.11 | 0.87 | 0.60 | EigenThreader | | RLTAVKQVVSDFIDQRKGDRLGLV-LFGD-----HAYLQTPLTFLDRTVL------NLVGQRTALATKTFIESGANPLEAAQLAKDN-----HAKIYTVGIG--AGEQTVNTARDLDDTLTKIATTGGQYFRARNADELAE |
5 | 2ynmC1 | 0.11 | 0.08 | 0.73 | 0.29 | HHpred | | --------------------------------DAFFLVVGSRTCAH-LIQSAAGVMIFAEPRFGTAILEERDLAGLAHEELDRVVKSLLRRPEIRTLFLVGSCP-SEVIKIDLSRAAERLSSQFG-QVRILNYSGSGI--- |
6 | 6rohA | 0.10 | 0.09 | 0.87 | 0.47 | MRFsearch | | --------------ALVQGGADLGYKFIIRKPEKEYQLLNICEFNSTRKRMSAIFRFPDGSIKLFCKGADTVILERLVEATMRHLEDYASEGLRTLCLAMRDISEAATTLDNRAEKLDEAANLIEKNLILIGATAI----- |
7 | 3aekA1 | 0.10 | 0.06 | 0.63 | 0.48 | FFAS-3D | | ----------------------------------------------QDAFFLVVGSRTAEPRFGTAVLEEQDLADAHKELDREVAKLLERRPDIRQLFLVSCP--SEVLKLDLDRAAERLSGLHAPHVRVYSYTGSG---- |
8 | 3fzyA | 0.08 | 0.07 | 0.94 | 0.55 | SPARKS-K | | QIIVQMENDPVVAKAAANLAGKHAVVVQLDSDGNYRVVYGL----DGKLRWQLVGHGRDTNNTRLSGYSADELAVKLAKFQQSFNQAENINNKPDHISIVGSSL----VSDDKQKFGHQFINAMDANVDVSVRSSELAVDE |
9 | 1yvuA | 0.14 | 0.13 | 0.91 | 0.63 | CNFpred | | NLKFVLLNVA---EQVLAKTGNIPYKLKEIEGKVDAFVGIDISRITTVNAVAFTKIFNKGELVRYYLTS-EKLTEKAIGDVFSLLEKLGFKKGSKIVVHRDGRL--------YRDEVAAFKKYGELYGYSLELLEIIKRNN |
10 | 1tndA | 0.05 | 0.04 | 0.84 | 1.00 | DEthreader | | NTLQSILAIVMLWKQA-FD--SQLN-------------DSAYYLDLEVTYPDVLRSRVKTT-----SAYDMNRMHESLHLFNSICNHRYF-ATTSIVLFLNKDVFSEKITYAGNYIKVQFLELNMRDKEIYSHMTCATDTV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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